Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq257780 84.2 3e-11 >seq257780 Length=1265 Score = 84.2 bits (92), Expect = 3e-11 Identities = 283/445 (64%), Gaps = 33/445 (7%) Strand=Plus/Minus Query 37197 CCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCttttt 37256 || ||||| | ||||| | |||||| || || || |||||||| | || | || Sbjct 444 CCCTCATCACGGCTTATTAGTTCATTGCTGAATGTCAACCCTGGCATAAGCCCACGCTTC 385 Query 37257 ttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAAT 37316 || | ||| || || | ||||| || ||||||||||||| || || || |||||||| Sbjct 384 TTCAGCCAGAAGATGGACGCAAACGACCCAGAAAAGAAAACCCCCTCTACGGCTGCAAAG 325 Query 37317 GCTACAAGACGTGTACCGAAA-GTTGAACTATAATCAGAAATCCAtttttttGTCCAATC 37375 ||||| || || | |||| || || | | ||| |||||| || || ||| || Sbjct 324 GCTACCAGGCG-CTCTGGAAACGTGGATTTTGAGTCACCAATCCACTTGAGTGCCCAGTC 266 Query 37376 TGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGt---------- 37425 ||||| ||| ||||| || |||| | ||| || |||||||||| Sbjct 265 AGCCTTCTTTTTCACACAGGGAAGGGTTTGTACTGCGTTAAAGAGAAAGTCGCTAAAAAT 206 Query 37426 ----------tt-----------ttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 || ||| | ||| | || || || || || || | Sbjct 205 AAAATAAGAGTTAGAGGAAGTACCGTTCGATAGGATCCTTGATGTACGTGTCGATGAGGA 146 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 | |||||| || |||||||||||||| || || || || || ||||| || || | || Sbjct 145 GAGAATACATCTCCGAGTGAATATTTTCGATTGCAATTTGGAATCCATAGAAGCAACGAG 86 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 |||| | | ||| || || | | || | | | | ||| || || |||||||| | Sbjct 85 CTTCCGGGACTTGTACTTCTTGACTGAAACGTTCCACAAGGTTCTCGTTGACTATCCCGT 26 Query 37585 CACTAGCTGCAAAGAAAGCAAGAAC 37609 | || || ||||| || |||||||| Sbjct 25 CGCTTGCGGCAAAAAATGCAAGAAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588745159311840