Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq219432 109 1e-18 >seq219432 Length=1578 Score = 109 bits (120), Expect = 1e-18 Identities = 166/236 (70%), Gaps = 3/236 (1%) Strand=Plus/Minus Query 213820 GCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCA 213879 |||| || ||||| || | ||| || ||| ||| || || | || || | || || Sbjct 608 GCATAAATAGGTCAGGAATCCAGAGAGCGTGGAAGAGATCACGAGTTCTAGTTTCTTCAG 549 Query 213880 CTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGT 213939 | |||| |||||||||||| |||| ||| | | ||||| | |||||| || || | || Sbjct 548 CGCCAGTGTTTTTGCGCAGCTCTACAAACTGCAGAATGTCTGGGTGCCATGGTTCTAGGT 489 Query 213940 AGATGGCAAAGGCGCCCGGCC---TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGT 213996 | || || |||||||| |||| | || |||||||| || || || ||| ||| Sbjct 488 AAATCGCGAAGGCGCCTGGCCGTTTGTTTCCGCCCTGATCAACATACCGGGCGGTGTTGT 429 Query 213997 TGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATA 214052 || | | ||| || | || |||| |||||||||| ||| || || ||||||||| Sbjct 428 TGTAAACGCGGAGCATTGGAACCAAACCGTTGGACTCTCCATTTGTACCCGCTATA 373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 925915703792640