Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq270649 84.2 3e-11
seq43131 84.2 3e-11
>seq270649
Length=1181
Score = 84.2 bits (92), Expect = 3e-11
Identities = 114/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 13553 GGTATTCCCAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGAAAGTGTACT 13612
|| || || || || ||||| || ||| | || ||||| | |||| |||||
Sbjct 169 GGCATCCCAAAATTAGATGATGCCAACGACGCCGGTACCAAGAATTCTGCCGCCTGTACG 228
Query 13613 CTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTT 13672
||||| | || ||||| ||||| ||||| ||||| || ||||||||| | || |||
Sbjct 229 CTCATCCTTACGGAGGGAGATTCAGCTAAGACCCTGGCTGTTGCGGGTTTGAGCGTGGTT 288
Query 13673 GGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAAA 13711
|||||||| | |||||||| || ||||| || || |||
Sbjct 289 GGTCGTGACCGTTACGGTGTTTTTCCACTGCGAGGCAAA 327
>seq43131
Length=6507
Score = 84.2 bits (92), Expect = 3e-11
Identities = 114/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 13553 GGTATTCCCAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGAAAGTGTACT 13612
|| || || || || ||||| || ||| | || ||||| | |||| |||||
Sbjct 4571 GGCATCCCAAAATTAGATGATGCCAACGACGCCGGTACCAAGAATTCTGCCGCCTGTACG 4630
Query 13613 CTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTT 13672
||||| | || ||||| ||||| ||||| ||||| || ||||||||| | || |||
Sbjct 4631 CTCATCCTTACGGAGGGAGATTCAGCTAAGACCCTGGCTGTTGCGGGTTTGAGCGTGGTT 4690
Query 13673 GGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAAA 13711
|||||||| | |||||||| || ||||| || || |||
Sbjct 4691 GGTCGTGACCGTTACGGTGTTTTTCCACTGCGAGGCAAA 4729
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592972315140480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |