Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq430912 104 3e-16 >seq430912 Length=607 Score = 104 bits (114), Expect = 3e-16 Identities = 150/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGC-GC--GTGC 1254399 || ||||||| || || ||| || ||| | || || ||||||||||| | || || Sbjct 139 GCTTGGCCAGCTCACCCGGCAGGAGCAGCCTGACCGCCGTCTGGATCTCTCTGCTGGTAA 198 Query 1254400 CGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459 | ||| || |||||| |||| | || |||| | ||| | |||| | |||| Sbjct 199 TGGTCGACTT---CTTGTTGTAGTGAGAGAGGCGGCTAGACTCCGCAGCGATCCTCTCGA 255 Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519 |||||||| || || |||||||||| |||||| | |||| |||||||||| || | Sbjct 256 AGATGTCGTTCACGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATGCCCGTATCAG 315 Query 1254520 GGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| ||| |||||||||||| Sbjct 316 GGTGCACCTGACGGAGGACCTTGTAGATG 344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6067551525179532