Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq29733 150 2e-31
seq46123 145 7e-30
seq46948 143 2e-29
seq154141 109 5e-19
seq233574 96.9 3e-15
>seq29733
Length=7895
Score = 150 bits (166), Expect = 2e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| ||||||| || ||||| || |||||||| || || || || |||
Sbjct 496 ATGCAGATCTTCGTTAAAACCCTTACCGGCAAGACTATTACTCTGGAGGTTGAGCCCAGT 555
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||| | | || | || || |||||||||||||| || ||||| || || || ||
Sbjct 556 GACTCGATCGAGAATGTGAAGGCTAAGATCCAAGACAAGGAGGGAATCCCGCCAGACCAG 615
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || ||||||||||||| |||||||| || ||| | | | | || ||||| |||
Sbjct 616 CAGCGGCTGATCTTTGCCGGCAAACAGCTCGAAGATGGCCGCACCCTTTCCGATTACAAC 675
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|||||||||||||| || | ||| |||| |||||| | ||||| |||
Sbjct 676 ATTCAAAAGGAATCAACCTTGCACCTGGTCTTGCGACTCCGCGGCGGC 723
Score = 84.2 bits (92), Expect = 2e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | || |||||||||||||| || || || || | | |
Sbjct 1125 ATGCAGATCTTTGTGAAGACATTGACGGGTAAAACTATTACTCTGGAGGTCGAGCCTAGC 1184
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||| | | || | || ||| ||||||||| ||||||||||| || || || || |||
Sbjct 1185 GACTCTATTGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGCATCCCACCGGACCAA 1244
Query 24824 CAACGTTTGAT 24834
|| | |||||
Sbjct 1245 CAGAGGTTGAT 1255
>seq46123
Length=6266
Score = 145 bits (160), Expect = 7e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| ||||||| || ||||| || |||||||| || || || || |||
Sbjct 1177 ATGCAGATCTTCGTTAAAACCCTTACCGGCAAGACTATTACTCTGGAGGTTGAGCCCAGT 1236
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||| | | || | || || |||||||||||||| || ||||| || || || ||
Sbjct 1237 GACTCGATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCGCCAGACCAG 1296
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || ||||||||||||| |||||||| || ||| | | | | || ||||| |||
Sbjct 1297 CAGCGACTGATCTTTGCCGGCAAACAGCTCGAAGATGGCCGCACCCTTTCCGATTACAAC 1356
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|||||||| ||||| || | ||| |||| |||||| | ||||| |||
Sbjct 1357 ATTCAAAAAGAATCAACCTTGCACCTGGTCTTGCGACTCCGCGGCGGC 1404
Score = 136 bits (150), Expect = 4e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | || || || || ||||| || || || || ||| |
Sbjct 1405 ATGCAGATCTTTGTAAAGACCTTGACGGGCAAGACGATTACTCTGGAGGTCGAGCCCAGC 1464
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||| | | || | || ||| ||||||||| ||||||||||| || || || || |||
Sbjct 1465 GACTCTATTGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGCATCCCACCGGACCAA 1524
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||| || || || ||||| |||||| | | | || ||||| |||
Sbjct 1525 CAGAGGTTGATCTTCGCAGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGATTACAAC 1584
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
||||| ||||||||||| ||||| ||||| |||||
Sbjct 1585 ATTCAGAAGGAATCGACCCTACATTTGGTCTTGCG 1619
Score = 86.0 bits (94), Expect = 6e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | ||||| | ||||| |||||||| || || || || || |||
Sbjct 1920 ATGCAGATCTTTGTGAAAACATTGACCGGCAAAACTATCACTCTGGAGGTTGAGCCCAGT 1979
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||| | | || | || || |||||||| ||||| || || || || || || ||
Sbjct 1980 GACTCGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGGATCCCGCCAGACCAG 2039
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858
|| || ||||||||||||| || ||||| || ||
Sbjct 2040 CAGCGACTGATCTTTGCCGGTAAGCAGCTCGAAGA 2074
>seq46948
Length=6204
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| ||||||| || ||||| || |||||||| || || || || |||
Sbjct 843 ATGCAGATCTTCGTTAAAACCCTTACCGGCAAGACTATTACTCTGGAGGTTGAGCCCAGT 902
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||| | | || | || || |||||||||||||| || ||||| || || || |||
Sbjct 903 GACTCGATCGAGAATGTGAAGGCTAAGATCCAAGACAAGGAGGGAATCCCGCCAGACCAA 962
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || ||||||||||||| ||||| || || ||| | | | | || ||||| |||
Sbjct 963 CAGCGACTGATCTTTGCCGGCAAACAACTCGAAGATGGCCGCACCCTTTCTGATTACAAC 1022
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||||||||||| || | ||| | || |||||| | ||||| ||
Sbjct 1023 ATTCAAAAGGAATCAACCTTGCACCTAGTCTTGCGACTCCGCGGCGG 1069
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | || || || || ||||| || || || || ||| |
Sbjct 1071 ATGCAGATCTTTGTAAAGACCTTGACGGGCAAGACGATTACCCTGGAGGTCGAGCCCAGC 1130
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||| | | || | || ||| ||||||||| ||||||||||| || || || || |||
Sbjct 1131 GACTCTATTGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGCATCCCGCCGGACCAA 1190
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||| ||||| ||||| || |||||| | | | || ||||| |||
Sbjct 1191 CAGAGGTTGATCTTCGCCGGCAAACAACTTGAGGATGGCCGTACTCTTTCCGATTACAAC 1250
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| || || || || ||||| ||||| | ||||| ||
Sbjct 1251 ATTCAAAAGGAGTCAACCCTGCATTTGGTCTTGCGCCTTCGCGGTGG 1297
Score = 131 bits (144), Expect = 2e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || | || |||||||||||||| || || || || | | |
Sbjct 1527 ATGCAAATCTTTGTGAAGACATTGACGGGTAAAACTATTACTCTGGAGGTCGAGCCTAGC 1586
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||| | | || | || ||| |||||||| ||||||||||| || || || || |||
Sbjct 1587 GACTCCATTGAGAATGTGAAAGCGAAGATCCAGGACAAAGAAGGCATCCCACCGGACCAA 1646
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||| ||||| || ||||| ||||| | | | ||||| || ||
Sbjct 1647 CAGAGGTTGATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGCACGCTCTCAGACTACAAT 1706
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
||||||||||| || ||||| ||||||||| ||||
Sbjct 1707 ATTCAAAAGGAGTCTACACTGCACTTGGTGCTGCG 1741
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | || || || ||||| || || || || || |||
Sbjct 1299 ATGCAGATCTTTGTGAAGACATTGACGGGCAAGACTATCACTCTGGAGGTCGAGCCCAGT 1358
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||| | | || | || || |||||||| ||||| || ||||| || || || ||
Sbjct 1359 GACTCGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCGCCAGACCAG 1418
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || ||||||||||||| || ||||| || || | | | | || || || |||
Sbjct 1419 CAGCGACTGATCTTTGCCGGTAAGCAGCTCGAAGACGGTCGCACCCTCTCCGACTACAAC 1478
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||||||||||| || | ||| |||| |||||| | ||||| ||
Sbjct 1479 ATTCAAAAGGAATCAACCTTGCACCTGGTCTTGCGACTCCGCGGTGG 1525
>seq154141
Length=2423
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||||| || || || || || ||||| || || || | | |
Sbjct 79 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATAACGCTAGAGGTGGAGCCGAGC 138
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||| | | || | || || |||||||| ||||| ||||| || ||||| || ||
Sbjct 139 GACTCGATTGAGAATGTGAAGACGAAGATCCAGGACAAGGAAGGCATCCCTCCAGACCAG 198
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||| |||||||||| || || ||| |||| || | | ||||||| || |||
Sbjct 199 CAACGTCTGATCTTTGCTGGTAAGCAGTTGGAAGACGGTCGTACGCTGTCAGACTACAAC 258
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || ||||| || |||| | || |||| || |||
Sbjct 259 ATCCAGAAGGAGTCAACACTGCATCTGGTTCTCCGTCTGCGTGGTGGC 306
>seq233574
Length=1449
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||||| || || || || || ||||| || || || | |
Sbjct 79 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATAACGCTAGAGGTGGAGCCGAGT 138
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||| | | || | || || ||||| || ||||| ||||| || || || || ||
Sbjct 139 GACTCGATTGAGAATGTGAAGGCGAAGATTCAGGACAAGGAAGGCATCCCCCCAGACCAG 198
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||| |||||||||| || || ||| |||| || | | ||||||| || |||
Sbjct 199 CAACGTCTGATCTTTGCTGGTAAGCAGTTGGAAGACGGTCGTACGCTGTCAGACTACAAC 258
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||| |||| | || |||| || |||
Sbjct 259 ATCCAGAAGGAGTCAACGCTGCACCTGGTTCTTCGTCTGCGTGGTGGC 306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447184739966880
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