Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq46948 87.8 1e-12
>seq46948
Length=6204
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| ||||| || || || || || ||||| ||||| | || |||||| |
Sbjct 1527 ATGCAAATCTTTGTGAAGACATTGACGGGTAAAACTATTACTCTGGAGGTCGAGCCTAGC 1586
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| | | | | || ||| |||||| |||||||||||| | || ||| |||
Sbjct 1587 GACTCCATTGAGAATGTGAAAGCGAAGATCCAGGACAAAGAAGGCATCCCACCGGACCAA 1646
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || | || | || ||||| ||||| ||||| | | | || | | || |||||
Sbjct 1647 CAGAGGTTGATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGCACGCTCTCAGACTACAAT 1706
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAAA 110503
|||||||| || ||||| ||||| ||||| | | || || || ||| ||
Sbjct 1707 ATTCAAAAGGAGTCTACACTGCACTTGGTGCTGCGTCTTCGTGGTGGATAA 1757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410414421149228
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |