Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq450881 78.8 3e-11
seq338765 78.8 3e-11
seq324023 78.8 3e-11
seq292568 78.8 3e-11
seq174655 78.8 3e-11
seq156136 78.8 3e-11
seq71422 78.8 3e-11
seq69196 78.8 3e-11
seq39836 78.8 3e-11
seq22176 78.8 3e-11
seq19321 78.8 3e-11
seq15808 78.8 3e-11
seq9111 78.8 3e-11
>seq450881
Length=562
Score = 78.8 bits (86), Expect = 3e-11
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
||||||||| |||||||| |||||||||||||||||| ||||| ||||| | ||||||
Sbjct 65 TAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGATCCCGGG 8
>seq338765
Length=847
Score = 78.8 bits (86), Expect = 3e-11
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
||||||||| |||||||| |||||||||||||||||| ||||| ||||| | ||||||
Sbjct 204 TAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGATCCCGGG 147
>seq324023
Length=906
Score = 78.8 bits (86), Expect = 3e-11
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
||||||||| |||||||| |||||||||||||||||| ||||| ||||| | ||||||
Sbjct 309 TAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGATCCCGGG 252
>seq292568
Length=1058
Score = 78.8 bits (86), Expect = 3e-11
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
||||||||| |||||||| |||||||||||||||||| ||||| ||||| | ||||||
Sbjct 65 TAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGATCCCGGG 8
>seq174655
Length=2100
Score = 78.8 bits (86), Expect = 3e-11
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
||||||||| |||||||| |||||||||||||||||| ||||| ||||| | ||||||
Sbjct 981 TAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGATCCCGGG 1038
Score = 78.8 bits (86), Expect = 3e-11
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
||||||||| |||||||| |||||||||||||||||| ||||| ||||| | ||||||
Sbjct 1324 TAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGATCCCGGG 1381
>seq156136
Length=2389
Score = 78.8 bits (86), Expect = 3e-11
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
||||||||| |||||||| |||||||||||||||||| ||||| ||||| | ||||||
Sbjct 1396 TAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGATCCCGGG 1339
>seq71422
Length=4748
Score = 78.8 bits (86), Expect = 3e-11
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
||||||||| |||||||| |||||||||||||||||| ||||| ||||| | ||||||
Sbjct 2028 TAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGATCCCGGG 1971
>seq69196
Length=4854
Score = 78.8 bits (86), Expect = 3e-11
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
||||||||| |||||||| |||||||||||||||||| ||||| ||||| | ||||||
Sbjct 3629 TAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGATCCCGGG 3572
>seq39836
Length=6802
Score = 78.8 bits (86), Expect = 3e-11
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
||||||||| |||||||| |||||||||||||||||| ||||| ||||| | ||||||
Sbjct 3850 TAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGATCCCGGG 3793
>seq22176
Length=9058
Score = 78.8 bits (86), Expect = 3e-11
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
||||||||| |||||||| |||||||||||||||||| ||||| ||||| | ||||||
Sbjct 6526 TAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGATCCCGGG 6469
>seq19321
Length=9611
Score = 78.8 bits (86), Expect = 3e-11
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
||||||||| |||||||| |||||||||||||||||| ||||| ||||| | ||||||
Sbjct 6994 TAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGATCCCGGG 6937
>seq15808
Length=10438
Score = 78.8 bits (86), Expect = 3e-11
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
||||||||| |||||||| |||||||||||||||||| ||||| ||||| | ||||||
Sbjct 4740 TAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGATCCCGGG 4683
>seq9111
Length=12834
Score = 78.8 bits (86), Expect = 3e-11
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
||||||||| |||||||| |||||||||||||||||| ||||| ||||| | ||||||
Sbjct 7657 TAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGATCCCGGG 7600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15765974241420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |