Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq46948 95.1 1e-14
>seq46948
Length=6204
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | |||||||| || || || || || |||| || | || ||||| ||| |
Sbjct 1071 ATGCAGATCTTTGTAAAGACCTTGACGGGCAAGACGATTACCCTGGAGGTCGAGCCCAGC 1130
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| |||| ||| | || ||| ||| || || ||||| || || ||||| || ||
Sbjct 1131 GACTCTATTGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGCATCCCGCCGGACCAA 1190
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| || | || | || |||||||||||| || |||| | | | | |||||||||
Sbjct 1191 CAGAGGTTGATCTTCGCCGGCAAACAACTTGAGGATGGCCGTACTCTTTCCGATTACAAC 1250
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386
|||||||| || || ||| | ||||| || ||
Sbjct 1251 ATTCAAAAGGAGTCAACCCTGCATTTGGTCTT 1282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 442410503022720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |