Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq46948 105 5e-18
seq46123 96.9 3e-15
>seq46948
Length=6204
Score = 105 bits (116), Expect = 5e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||| || ||||| || || ||||| |||||||| |||||| |||| || ||| ||
Sbjct 1071 ATGCAGATCTTTGTAAAGACCTTGACGGGCAAGACGATTACCCTGGAGGTCGAGCCCAGC 1130
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| ||| ||| | |||||| ||| || |||||||||||| | || || |||
Sbjct 1131 GACTCTATTGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGCATCCCGCCGGACCAA 1190
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
|| ||| | || | || ||||||||| | || ||| ||| | ||||||||||
Sbjct 1191 CAGAGGTTGATCTTCGCCGGCAAACAACTTGAGGATGGCCGTACTCTTTCCGATTACAAC 1250
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTG 106472
|| ||||| || || || || ||||| || |||
Sbjct 1251 ATTCAAAAGGAGTCAACCCTGCATTTGGTCTTG 1283
>seq46123
Length=6266
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||| || ||||| || || ||||| |||||||| ||||| |||| || ||| ||
Sbjct 1405 ATGCAGATCTTTGTAAAGACCTTGACGGGCAAGACGATTACTCTGGAGGTCGAGCCCAGC 1464
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| ||| ||| | |||||| ||| || |||||||||||| | || || |||
Sbjct 1465 GACTCTATTGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGCATCCCACCGGACCAA 1524
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
|| ||| | || | || ||||| || | || ||| ||| | ||||||||||
Sbjct 1525 CAGAGGTTGATCTTCGCAGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGATTACAAC 1584
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTG 106472
|| || || ||||| || |||||||| || |||
Sbjct 1585 ATTCAGAAGGAATCGACCCTACATTTGGTCTTG 1617
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399964223312768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |