Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq430912 114 2e-19
>seq430912
Length=607
Score = 114 bits (126), Expect = 2e-19
Identities = 168/235 (71%), Gaps = 12/235 (5%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
||||||||||| ||| ||||||||||| || || |||| ||| |||| ||
Sbjct 343 ATCTACAAGGTCCTCCGTCAGGTGCACCCTGATAC-----GGGCATC-TCCTCCAAGGCC 290
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||||||||||||||| || || |||||||| |||| | |||| | ||| | |
Sbjct 289 ATGTCGATCATGAACTCCTTCGTGAACGACATCTTCGAGAGGATCGCTGCGGAGTCTAGC 230
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGC---GAGATCCAGACCGCC 725087
||||| | | || ||||||| || ||| | || || ||||||||||| ||
Sbjct 229 CGCCTCTCTCACTACAACAAG---AAGTCGACCATTACCAGCAGAGAGATCCAGACGGCG 173
Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| || ||| || || ||||||| ||| |||||||| ||||||||||
Sbjct 172 GTCAGGCTGCTCCTGCCGGGTGAGCTGGCCAAGCATGCCGTCTCTGAGGGCACCA 118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7131283219156152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |