Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq430912 114 2e-19 >seq430912 Length=607 Score = 114 bits (126), Expect = 2e-19 Identities = 168/235 (71%), Gaps = 12/235 (5%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||| ||| ||||||||||| || || |||| ||| |||| || Sbjct 343 ATCTACAAGGTCCTCCGTCAGGTGCACCCTGATAC-----GGGCATC-TCCTCCAAGGCC 290 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||||||||||||||| || || |||||||| |||| | |||| | ||| | | Sbjct 289 ATGTCGATCATGAACTCCTTCGTGAACGACATCTTCGAGAGGATCGCTGCGGAGTCTAGC 230 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGC---GAGATCCAGACCGCC 725087 ||||| | | || ||||||| || ||| | || || ||||||||||| || Sbjct 229 CGCCTCTCTCACTACAACAAG---AAGTCGACCATTACCAGCAGAGAGATCCAGACGGCG 173 Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| || ||| || || ||||||| ||| |||||||| |||||||||| Sbjct 172 GTCAGGCTGCTCCTGCCGGGTGAGCTGGCCAAGCATGCCGTCTCTGAGGGCACCA 118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7131283219156152