Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq46948 140 3e-28
seq46123 129 5e-25
seq468507 113 4e-20
seq29733 111 1e-19
>seq46948
Length=6204
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| || | | ||| |||| || || || ||||||||||||||||| ||||
Sbjct 1525 CCACCGCGGAGTCGCAAGACCAGGTGCAAGGTTGATTCCTTTTGAATGTTGTAGTCGGAG 1466
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || |||| || ||||||||||| ||||| |||| ||||||||||| | ||
Sbjct 1465 AGGGTGCGACCGTCTTCGAGCTGCTTACCGGCAAAGATCAGTCGCTGCTGGTCTGGCGGG 1406
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||||||| |||||| ||||| | | | || ||| || | || |||
Sbjct 1405 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGAGTCACTGGGCTCGACC 1346
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| ||||| || || |||||||| || |||||||| ||||||||
Sbjct 1345 TCCAGAGTGATAGTCTTGCCCGTCAATGTCTTCACAAAGATCTGCAT 1299
Score = 136 bits (150), Expect = 4e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568
||||||||| | | || |||||| || | ||| |||||||||||| ||||| || |
Sbjct 1754 TCCACCACGAAGACGCAGCACCAAGTGCAGTGTAGACTCCTTTTGAATATTGTAGTCTGA 1695
Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628
| || || |||| || ||||||||||| || || ||||||| ||| ||||||| ||
Sbjct 1694 GAGCGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATCAACCTCTGTTGGTCCGGTGG 1635
Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| || || |||||| |||||| |||| | | | | | |||||| | || ||
Sbjct 1634 GATGCCTTCTTTGTCCTGGATCTTCGCTTTCACATTCTCAATGGAGTCGCTAGGCTCGAC 1575
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| || || |||||||||||||| || |||||||| || |||||
Sbjct 1574 CTCCAGAGTAATAGTTTTACCCGTCAATGTCTTCACAAAGATTTGCAT 1527
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| || | | ||| |||||||| | || |||||||||||||||||||||||
Sbjct 1297 CCACCGCGAAGGCGCAAGACCAAATGCAGGGTTGACTCCTTTTGAATGTTGTAATCGGAA 1238
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || || || || || || || ||||||| ||| ||||||| ||
Sbjct 1237 AGAGTACGGCCATCCTCAAGTTGTTTGCCGGCGAAGATCAACCTCTGTTGGTCCGGCGGG 1178
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || || |||||| ||||||| |||| | | | | | |||||| | || |||
Sbjct 1177 ATGCCTTCTTTGTCCTGGATCTTTGCTTTCACATTCTCAATAGAGTCGCTGGGCTCGACC 1118
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| || ||||| || |||||||| || || ||||| ||||||||
Sbjct 1117 TCCAGGGTAATCGTCTTGCCCGTCAAGGTCTTTACAAAGATCTGCAT 1071
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|||||||||||||||||||| | | ||| || | || || || || || || |||||
Sbjct 1033 TCCTTTTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCGAGTTGTTTGCCGGCAAAG 974
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| ||||| ||||| | || | | ||||||||| |||||| ||||| | |
Sbjct 973 ATCAGTCGCTGTTGGTCTGGCGGGATTCCCTCCTTGTCTTGGATCTTAGCCTTCACATTC 914
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | || ||| || | || ||||||| || || || || || || | ||||| ||
Sbjct 913 TCGATCGAGTCACTGGGCTCAACCTCCAGAGTAATAGTCTTGCCGGTAAGGGTTTTAACG 854
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 853 AAGATCTGCAT 843
>seq46123
Length=6266
Score = 129 bits (142), Expect = 5e-25
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 35558 TTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGC 35617
|||||||||| | ||| || |||| || ||||||||||| ||||| |||| ||||||
Sbjct 2098 TTGTAATCGGAGAGGGTGCGACCGTCTTCGAGCTGCTTACCGGCAAAGATCAGTCGCTGC 2039
Query 35618 TGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCG 35677
||||| | || | | |||||||||| |||||| ||||| | | | | || |||
Sbjct 2038 TGGTCTGGCGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGAGTCA 1979
Query 35678 CTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | || ||||||| ||||| ||||| || ||||| ||||||||||| ||||||||
Sbjct 1978 CTGGGCTCAACCTCCAGAGTGATAGTTTTGCCGGTCAATGTTTTCACAAAGATCTGCAT 1920
Score = 127 bits (140), Expect = 2e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583
||| |||||||||| || ||||| |||||||||||||||| | || || | ||
Sbjct 1617 CAAGACCAAATGTAGGGTCGATTCCTTCTGAATGTTGTAATCGGAAAGAGTGCGGCCATC 1558
Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643
|| |||||||| || || || ||||||| ||| ||||||| || | || || |||||
Sbjct 1557 CTCAAGCTGCTTGCCTGCGAAGATCAACCTCTGTTGGTCCGGTGGGATGCCTTCTTTGTC 1498
Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703
| ||||||| |||| | | | | | |||||| | || ||||||| || |||||
Sbjct 1497 CTGGATCTTTGCTTTCACATTCTCAATAGAGTCGCTGGGCTCGACCTCCAGAGTAATCGT 1438
Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| |||||||| || || ||||| ||||||||
Sbjct 1437 CTTGCCCGTCAAGGTCTTTACAAAGATCTGCAT 1405
Score = 102 bits (112), Expect = 7e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|| ||||||||||||||||||| | ||| || | || || ||||| || || |||||
Sbjct 1367 TCTTTTTGAATGTTGTAATCGGAAAGGGTGCGGCCATCTTCGAGCTGTTTGCCGGCAAAG 1308
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| ||||||||||| | || | | ||||||||| |||||| ||||| | |
Sbjct 1307 ATCAGTCGCTGCTGGTCTGGCGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCACATTC 1248
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | || ||| || | || ||||||| || || || || || || | ||||| ||
Sbjct 1247 TCGATCGAGTCACTGGGCTCAACCTCCAGAGTAATAGTCTTGCCGGTAAGGGTTTTAACG 1188
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 1187 AAGATCTGCAT 1177
>seq468507
Length=525
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
||||||||| | || |||||||| | ||| || || || || ||||| ||
Sbjct 15 CACCAAATGCACGGTTGAATCCTTTTGGACCCTGTGGTCTAACAGTGTACGATCGTCTTC 74
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
|||| ||||||| ||||| |||| |||||||||||| |||| || ||||||||
Sbjct 75 CAGCGGCTTACCGGCAAAAATCAGAAGCTGCTGGTCCGGCGGAATGCCCTCCTTGTAATC 134
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
||| | |||||| | ||||||| || | |||||| | || ||| ||||| ||
Sbjct 135 AATCATCGCCTTCAGTTCTCTTACCGTGTTACTAGGTTCCACATTCAGCGTTATCGTCTT 194
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||||||| || ||||| |||||||||||
Sbjct 195 GCCCGTCAACGTCTTCACGAATATCTGCAT 224
>seq29733
Length=7895
Score = 111 bits (122), Expect = 1e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|||||||||||||||||||||| | ||| || | || || ||||| || || |||||
Sbjct 686 TCCTTTTGAATGTTGTAATCGGAAAGGGTGCGGCCATCTTCGAGCTGTTTGCCGGCAAAG 627
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| |||||||||||| | || | | ||||||||| |||||| ||||| | |
Sbjct 626 ATCAGCCGCTGCTGGTCTGGCGGGATTCCCTCCTTGTCTTGGATCTTAGCCTTCACATTC 567
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | || ||| || | || ||||||| || || || || || || | ||||| ||
Sbjct 566 TCGATCGAGTCACTGGGCTCAACCTCCAGAGTAATAGTCTTGCCGGTAAGGGTTTTAACG 507
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 506 AAGATCTGCAT 496
Score = 87.8 bits (96), Expect = 2e-12
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||||| ||| ||||||| || | || || |||||| ||||||| |||| | |
Sbjct 1255 ATCAACCTCTGTTGGTCCGGTGGGATGCCTTCTTTGTCCTGGATCTTTGCTTTCACATTC 1196
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | | |||||| | || ||||||| || || |||||||||||||| || ||||||
Sbjct 1195 TCAATAGAGTCGCTAGGCTCGACCTCCAGAGTAATAGTTTTACCCGTCAATGTCTTCACA 1136
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 1135 AAGATCTGCAT 1125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448075337131680
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