Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq219432 100 9e-16 >seq219432 Length=1578 Score = 100 bits (110), Expect = 9e-16 Identities = 201/296 (68%), Gaps = 4/296 (1%) Strand=Plus/Plus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 |||||| |||| || | ||||||| || || || || ||||| || || |||||| Sbjct 410 CCAATGCTCCGCGTTTACAACAACACCGCCCGGTATGTTGATCAGGGCGGAAACAAACGG 469 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100 ||||| || ||| | || ||||| || || |||||| | |||||| | |||| || | Sbjct 470 CCAGGCGCCTTCGCGATTTACCTAGAACCATGGCACCCAGACATTCTGCAGTTTGTAGAG 529 Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGG 255160 ||| | | || || ||| | || || | | || || ||| | |||| ||||| Sbjct 530 CTGCGCAAAAACACTGGCGCTGAAGAAACTAGAACTCGTGATCTCTTCCACGCTCTCTGG 589 Query 255161 --TGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGTC 255218 | ||| | || |||||||||||||| || |||| | |||| || ||| || Sbjct 590 ATTCCTG--ACCTATTTATGCGACGCGTCCAAGCCAACGACAAGTGGACTCTAATGGATC 647 Query 255219 CCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTAT 255274 | | | || |||||| |||||| ||||||||| || || ||||| ||||| Sbjct 648 CTCATGAGTGTCCAGGTCTATTCGACTGTTGGGGTGAAGAATTCGAAAAGTTGTAT 703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1578518973670220