Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq219432 100 9e-16
>seq219432
Length=1578
Score = 100 bits (110), Expect = 9e-16
Identities = 201/296 (68%), Gaps = 4/296 (1%)
Strand=Plus/Plus
Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040
|||||| |||| || | ||||||| || || || || ||||| || || ||||||
Sbjct 410 CCAATGCTCCGCGTTTACAACAACACCGCCCGGTATGTTGATCAGGGCGGAAACAAACGG 469
Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100
||||| || ||| | || ||||| || || |||||| | |||||| | |||| || |
Sbjct 470 CCAGGCGCCTTCGCGATTTACCTAGAACCATGGCACCCAGACATTCTGCAGTTTGTAGAG 529
Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGG 255160
||| | | || || ||| | || || | | || || ||| | |||| |||||
Sbjct 530 CTGCGCAAAAACACTGGCGCTGAAGAAACTAGAACTCGTGATCTCTTCCACGCTCTCTGG 589
Query 255161 --TGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGTC 255218
| ||| | || |||||||||||||| || |||| | |||| || ||| ||
Sbjct 590 ATTCCTG--ACCTATTTATGCGACGCGTCCAAGCCAACGACAAGTGGACTCTAATGGATC 647
Query 255219 CCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTAT 255274
| | | || |||||| |||||| ||||||||| || || ||||| |||||
Sbjct 648 CTCATGAGTGTCCAGGTCTATTCGACTGTTGGGGTGAAGAATTCGAAAAGTTGTAT 703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1578518973670220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |