Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq270649 84.2 3e-11
seq43131 84.2 3e-11
>seq270649
Length=1181
Score = 84.2 bits (92), Expect = 3e-11
Identities = 114/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 182696 TTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACCCGCAAC 182755
||| || || ||||| || |||||||| | ||||||||||| || | |||||||||
Sbjct 327 TTTGCCTCGCAGTGGAAAAACACCGTAACGGTCACGACCAACCACGCTCAAACCCGCAAC 268
Query 182756 CGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACTTTCCAGATTGTGC 182815
|| ||||| || || ||||| |||||||| | ||||| ||||| |||| |
Sbjct 267 AGCCAGGGTCTTAGCTGAATCTCCCTCCGTAAGGATGAGCGTACAGGCGGCAGAATTCTT 208
Query 182816 CGTACCCGCCTTGTTCGCGTCATCCAACTTGGGAATACC 182854
||||| || | ||| || ||||| || || || || ||
Sbjct 207 GGTACCGGCGTCGTTGGCATCATCTAATTTTGGGATGCC 169
>seq43131
Length=6507
Score = 84.2 bits (92), Expect = 3e-11
Identities = 114/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 182696 TTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACCCGCAAC 182755
||| || || ||||| || |||||||| | ||||||||||| || | |||||||||
Sbjct 4729 TTTGCCTCGCAGTGGAAAAACACCGTAACGGTCACGACCAACCACGCTCAAACCCGCAAC 4670
Query 182756 CGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACTTTCCAGATTGTGC 182815
|| ||||| || || ||||| |||||||| | ||||| ||||| |||| |
Sbjct 4669 AGCCAGGGTCTTAGCTGAATCTCCCTCCGTAAGGATGAGCGTACAGGCGGCAGAATTCTT 4610
Query 182816 CGTACCCGCCTTGTTCGCGTCATCCAACTTGGGAATACC 182854
||||| || | ||| || ||||| || || || || ||
Sbjct 4609 GGTACCGGCGTCGTTGGCATCATCTAATTTTGGGATGCC 4571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 624244998441600
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |