Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq219432 129 6e-25 >seq219432 Length=1578 Score = 129 bits (142), Expect = 6e-25 Identities = 305/457 (67%), Gaps = 4/457 (1%) Strand=Plus/Plus Query 19167 AGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACG 19226 |||| || || || ||| | |||| ||||||||||| | || ||||| || ||| Sbjct 153 AGACTTATGAACTTATGTCCGGAAAGTGGTTCACGCACGCATCTCCAACCCTGTTTAACT 212 Query 19227 CCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCA 19286 | || || || |||||||| || |||| || | | |||||||| ||||||| Sbjct 213 CGGGGACCCCTTTGCCCCAGATGTCCAGTTGTTATCTTCTCACCATGAAGGACGACAGCA 272 Query 19287 TTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTA 19346 | |||||||| || || || | ||| |||| |||| || ||||| | || || | Sbjct 273 TAGAGGGCATTTATGATACATTAAAGCAGTGTGCGCTTATATCCAAAAATGCTGGCGGCA 332 Query 19347 TCGGGATCCACTGCTCGAAT--ATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGG 19404 |||| || || | || | | ||| | | ||||| || || || || || Sbjct 333 TCGGTCTCAAC-GTTC-ATTGCATCAGAAGCAAGGGTACTTTTATAGCGGGTACAAATGG 390 Query 19405 AGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAA 19464 || || ||||| | || |||||||||||||| | ||||||||| ||| |||| || | Sbjct 391 AGAGTCCAACGGTTTGGTTCCAATGCTCCGCGTTTACAACAACACCGCCCGGTATGTTGA 450 Query 19465 CCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGA 19524 ||||| || |||||| ||| | ||||| || ||||| || ||||||||| | || Sbjct 451 TCAGGGCGGAAACAAACGGCCAGGCGCCTTCGCGATTTACCTAGAACCATGGCACCCAGA 510 Query 19525 CGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGA 19584 | | || | || | || |||||| ||| || | || || | | ||| || Sbjct 511 CATTCTGCAGTTTGTAGAGCTGCGCAAAAACACTGGCGCTGAAGAAACTAGAACTCGTGA 570 Query 19585 CCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATG 19621 |||||| || | |||||||| |||||||| ||| Sbjct 571 TCTCTTCCACGCTCTCTGGATTCCTGACCTATTTATG 607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545217222882240