Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq219432 129 6e-25
>seq219432
Length=1578
Score = 129 bits (142), Expect = 6e-25
Identities = 305/457 (67%), Gaps = 4/457 (1%)
Strand=Plus/Plus
Query 19167 AGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACG 19226
|||| || || || ||| | |||| ||||||||||| | || ||||| || |||
Sbjct 153 AGACTTATGAACTTATGTCCGGAAAGTGGTTCACGCACGCATCTCCAACCCTGTTTAACT 212
Query 19227 CCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCA 19286
| || || || |||||||| || |||| || | | |||||||| |||||||
Sbjct 213 CGGGGACCCCTTTGCCCCAGATGTCCAGTTGTTATCTTCTCACCATGAAGGACGACAGCA 272
Query 19287 TTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTA 19346
| |||||||| || || || | ||| |||| |||| || ||||| | || || |
Sbjct 273 TAGAGGGCATTTATGATACATTAAAGCAGTGTGCGCTTATATCCAAAAATGCTGGCGGCA 332
Query 19347 TCGGGATCCACTGCTCGAAT--ATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGG 19404
|||| || || | || | | ||| | | ||||| || || || || ||
Sbjct 333 TCGGTCTCAAC-GTTC-ATTGCATCAGAAGCAAGGGTACTTTTATAGCGGGTACAAATGG 390
Query 19405 AGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAA 19464
|| || ||||| | || |||||||||||||| | ||||||||| ||| |||| || |
Sbjct 391 AGAGTCCAACGGTTTGGTTCCAATGCTCCGCGTTTACAACAACACCGCCCGGTATGTTGA 450
Query 19465 CCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGA 19524
||||| || |||||| ||| | ||||| || ||||| || ||||||||| | ||
Sbjct 451 TCAGGGCGGAAACAAACGGCCAGGCGCCTTCGCGATTTACCTAGAACCATGGCACCCAGA 510
Query 19525 CGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGA 19584
| | || | || | || |||||| ||| || | || || | | ||| ||
Sbjct 511 CATTCTGCAGTTTGTAGAGCTGCGCAAAAACACTGGCGCTGAAGAAACTAGAACTCGTGA 570
Query 19585 CCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATG 19621
|||||| || | |||||||| |||||||| |||
Sbjct 571 TCTCTTCCACGCTCTCTGGATTCCTGACCTATTTATG 607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545217222882240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |