Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_028776.1
Length=59670
Score E
Sequences producing significant alignments: (Bits) Value
seq310908 86.0 2e-12
>seq310908
Length=965
Score = 86.0 bits (94), Expect = 2e-12
Identities = 162/235 (69%), Gaps = 4/235 (2%)
Strand=Plus/Minus
Query 30161 ACGCCACGACTTTCCATGCACATATGCTTGGCGTCAATATAAACACATACAGCTTTCGGG 30220
|| ||||| | |||||||||||||| | || || ||| || | ||| || | ||
Sbjct 259 ACACCACGCATAACCATGCACATATGCGTCGCCTCGATAACCACGCCGACACCTG-CTGG 201
Query 30221 TTTAAATGCTCCTGAATAGCGTCT--GCAATCTGGTTAGTAAGACGTTCCTGAACTTGCA 30278
| || || | | ||||| | |||||||| || || || ||||||||||| ||||
Sbjct 200 CTGAATGACTTCCGC-TAGCGCCATCGCAATCTGTTTCGTCAGTCGTTCCTGAACCTGCA 142
Query 30279 GTCGACGACTAAAAGCATCCACAACGCGAGACAGCTTACTAAGCCCAACGATCTTCCCAT 30338
|||||| ||| | ||||| | ||| | ||||||||| || || | || ||| ||||
Sbjct 141 ATCGACGTGAGAAAACTTCCACGATGCGCGCCAGCTTACTCAGTCCCAGGACCTTGCCAT 82
Query 30339 TGGGGACATAACCCACAACAGCACGCCCGATAATAGGAGCCATGTGATGCTCACA 30393
| || | |||||| | | |||| || | || || ||| ||| || |||||
Sbjct 81 TTGGCAAATAACCGATTGAAACACGGCCAACAAACGGCACCAAGTGGTGTTCACA 27
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 189729282945664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |