Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= NC_028776.1 Length=59670 Score E Sequences producing significant alignments: (Bits) Value seq310908 86.0 2e-12 >seq310908 Length=965 Score = 86.0 bits (94), Expect = 2e-12 Identities = 162/235 (69%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 30161 ACGCCACGACTTTCCATGCACATATGCTTGGCGTCAATATAAACACATACAGCTTTCGGG 30220 || ||||| | |||||||||||||| | || || ||| || | ||| || | || Sbjct 259 ACACCACGCATAACCATGCACATATGCGTCGCCTCGATAACCACGCCGACACCTG-CTGG 201 Query 30221 TTTAAATGCTCCTGAATAGCGTCT--GCAATCTGGTTAGTAAGACGTTCCTGAACTTGCA 30278 | || || | | ||||| | |||||||| || || || ||||||||||| |||| Sbjct 200 CTGAATGACTTCCGC-TAGCGCCATCGCAATCTGTTTCGTCAGTCGTTCCTGAACCTGCA 142 Query 30279 GTCGACGACTAAAAGCATCCACAACGCGAGACAGCTTACTAAGCCCAACGATCTTCCCAT 30338 |||||| ||| | ||||| | ||| | ||||||||| || || | || ||| |||| Sbjct 141 ATCGACGTGAGAAAACTTCCACGATGCGCGCCAGCTTACTCAGTCCCAGGACCTTGCCAT 82 Query 30339 TGGGGACATAACCCACAACAGCACGCCCGATAATAGGAGCCATGTGATGCTCACA 30393 | || | |||||| | | |||| || | || || ||| ||| || ||||| Sbjct 81 TTGGCAAATAACCGATTGAAACACGGCCAACAAACGGCACCAAGTGGTGTTCACA 27 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189729282945664