Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq257780 143 2e-29
>seq257780
Length=1265
Score = 143 bits (158), Expect = 2e-29
Identities = 403/622 (65%), Gaps = 45/622 (7%)
Strand=Plus/Minus
Query 4398 ATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTC 4457
|| |||||| ||| || |||||| || || || || |||||| || |||| |||
Sbjct 615 ATGTACTGGGCCATCAGACGGCAGTTCATGCCGATCAAGTCCACAGGAAGAGCGTCAGTC 556
Query 4458 AAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGAT 4517
| ||| || ||| ||| || ||||| || || ||| || || |||||
Sbjct 555 AGAAATTCCACTTCGATATCAACAGCTTCCCGCATAATCGCTTCTACGCGCTCCTTAGAG 496
Query 4518 GGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCT 4577
||||| ||| | || || |||| | ||| || || ||| || | || || ||
Sbjct 495 GGTTTGTTTCTGATGTGTCGGAACAGAAGACAAGCGAAGTCAGTGTGAAGTCCCTCATCA 436
Query 4578 CTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAA 4637
| ||| || ||||| || || || || || ||||| | || | ||| || |||||
Sbjct 435 CGGCTTATTAGTTCATTGCTGAATGTCAACCCTGGCATAAGCCCACGCTTCTTCAGCCAG 376
Query 4638 AATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTA-- 4695
|| || | ||||| |||||||||||||| | || |||||||| ||||| ||||| |
Sbjct 375 AAGATGGACGCAAACGACCCAGAAAAGAAAACCCCCTCTACGGCTGCAAAGGCTACCAGG 316
Query 4696 --ATCGGGACCCGAACGAGCTGGCTTT---GTCTTTAATCCATTTTAATGCCCAGTTAGC 4750
|| ||| |||| ||| ||| ||| |||||| || | |||||||| |||
Sbjct 315 CGCTCTGGA----AACG---TGGATTTTGAGTCACCAATCCACTTGAGTGCCCAGTCAGC 263
Query 4751 TTTTTTCTTAACGCACGGAATTGTGTATATAGCGTT-----------------AAATAAT 4793
|| || || || || |||| || | || ||||| ||||||
Sbjct 262 CTTCTTTTTCACACAGGGAAGGGTTTGTACTGCGTTAAAGAGAAAGTCGCTAAAAATAAA 203
Query 4794 TT---ACTT-----------TTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839
| | || ||| | || || | || || ||||| || || ||
Sbjct 202 ATAAGAGTTAGAGGAAGTACCGTTCGATAGGATCCTTGATGTACGTGTCGATGAGGAGAG 143
Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899
|||||| || || || |||||||| || ||||| || ||||| || ||||| | |||||
Sbjct 142 AATACATCTCCGAGTGAATATTTTCGATTGCAATTTGGAATCCATAGAAGCAACGAGCTT 83
Query 4900 CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCAC 4959
| | ||||| ||||| | || || | ||| || | ||| ||||| ||||| ||||| |
Sbjct 82 CCGGGACTTGTACTTCTTGACTGAAACGTTCCACAAGGTTCTCGTTGACTATCCCGTCGC 23
Query 4960 TGGCTGCAAAAAACGCCAAAAC 4981
| || |||||||| || | |||
Sbjct 22 TTGCGGCAAAAAATGCAAGAAC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424538889457868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |