Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq138866 111 2e-19 seq247507 98.7 1e-15 >seq138866 Length=2705 Score = 111 bits (122), Expect = 2e-19 Identities = 97/120 (81%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 8485 TTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCT 8544 ||||| ||||||||||| || || |||||||| | |||||||| |||||| || ||| | Sbjct 1769 TTTTGGATTTTTAGTAGTGACAGCGTTTCACCGTATTGGCCAGTATGGTCTTGATCTCTT 1828 Query 8545 GACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCA 8604 |||| |||||||| | ||||| ||||||| | |||||||||||||| | ||||||| Sbjct 1829 CACCT--TGTGATCCCCTTGCCTTGGCCTCCAAGTTTGCTGGGATTACAGACCTGAGCCA 1886 >seq247507 Length=1338 Score = 98.7 bits (108), Expect = 1e-15 Identities = 120/164 (73%), Gaps = 16/164 (10%) Strand=Plus/Plus Query 8351 CTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCCCG 8410 ||||||| ||| ||| || || |||| |||| ||||||||||| || ||||| || Sbjct 1175 CTGTTGCACAGCGTGGGGTACAATGGCGCCATCTTTACTCACTGCAACATCTGCCTCACG 1234 Query 8411 GGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACA-------GG--- 8460 ||||||||| ||| |||| ||||||||||| |||||||||| |||| || Sbjct 1235 GGTTCAAGCGATTGTCCTCCCTCAGCCTCCCAGGTAGCTGGGAGTACACCACACTGGGAC 1294 Query 8461 -----CAAAAGCCACCACGCCAAGCTAA-TTTTTGTATTTTTAG 8498 || ||||||| ||| |||||| |||||| |||||||| Sbjct 1295 TACACCAGCTGCCACCATGCCTAGCTAATTTTTTGGATTTTTAG 1338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518343453434400