Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq142476 96.9 5e-15 seq273375 91.5 2e-13 >seq142476 Length=2632 Score = 96.9 bits (106), Expect = 5e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 63742 AAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTGGT 63801 |||| ||| || | || |||||||||||| | | ||| || || || ||||| Sbjct 862 AAAACACCCCAAGTCGGCGATAAATTTGCTAGTCGCCACGGTCAGAAGGGGACATGTGGC 803 Query 63802 ATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTC 63861 || |||||||||| || |||||||| || || || || ||| ||||||| || || Sbjct 802 ATCCTTTATCGACAGGAGGATATGCCGTTCACTTGCGAGGGCATCACACCCGATATCATC 743 Query 63862 ATCAATCCACACGCTTTTCCCAGTCGTATGACC 63894 |||||||| |||||| | |||||||| |||||| Sbjct 742 ATCAATCCCCACGCTATCCCCAGTCGGATGACC 710 >seq273375 Length=1165 Score = 91.5 bits (100), Expect = 2e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 63742 AAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTGGT 63801 |||| ||| || | || |||||||||||| | | ||| || || || ||||| Sbjct 971 AAAACACCCCAAGTCGGCGATAAATTTGCTAGTCGCCACGGTCAGAAGGGGACATGTGGC 1030 Query 63802 ATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTC 63861 || |||||||||| || |||||||| || || || || ||| ||||||| || || Sbjct 1031 ATCCTTTATCGACAGGAGGATATGCCGTTCACTTGCGAAGGCATCACACCCGATATCATC 1090 Query 63862 ATCAATCCACACGCTTTTCCCAGTCGTATGACC 63894 ||||| || |||||| | |||||||| |||||| Sbjct 1091 ATCAACCCCCACGCTATCCCCAGTCGAATGACC 1123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 663052769897760