Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq142476 96.9 5e-15
seq273375 91.5 2e-13
>seq142476
Length=2632
Score = 96.9 bits (106), Expect = 5e-15
Identities = 113/153 (74%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 63742 AAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTGGT 63801
|||| ||| || | || |||||||||||| | | ||| || || || |||||
Sbjct 862 AAAACACCCCAAGTCGGCGATAAATTTGCTAGTCGCCACGGTCAGAAGGGGACATGTGGC 803
Query 63802 ATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTC 63861
|| |||||||||| || |||||||| || || || || ||| ||||||| || ||
Sbjct 802 ATCCTTTATCGACAGGAGGATATGCCGTTCACTTGCGAGGGCATCACACCCGATATCATC 743
Query 63862 ATCAATCCACACGCTTTTCCCAGTCGTATGACC 63894
|||||||| |||||| | |||||||| ||||||
Sbjct 742 ATCAATCCCCACGCTATCCCCAGTCGGATGACC 710
>seq273375
Length=1165
Score = 91.5 bits (100), Expect = 2e-13
Identities = 112/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 63742 AAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTGGT 63801
|||| ||| || | || |||||||||||| | | ||| || || || |||||
Sbjct 971 AAAACACCCCAAGTCGGCGATAAATTTGCTAGTCGCCACGGTCAGAAGGGGACATGTGGC 1030
Query 63802 ATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTC 63861
|| |||||||||| || |||||||| || || || || ||| ||||||| || ||
Sbjct 1031 ATCCTTTATCGACAGGAGGATATGCCGTTCACTTGCGAAGGCATCACACCCGATATCATC 1090
Query 63862 ATCAATCCACACGCTTTTCCCAGTCGTATGACC 63894
||||| || |||||| | |||||||| ||||||
Sbjct 1091 ATCAACCCCCACGCTATCCCCAGTCGAATGACC 1123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 663052769897760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |