Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20asiatica_20[genbank_20GCA_5F001693035.2_202016-09-02] 6,900 sequences; 168,679,183 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq52 89.7 4e-13 >seq52 Length=575441 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||||||||||||||||||| | |||||||| || || ||| | || || || | || Sbjct 526815 ATGCAGATATTTGTTAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCCAGT 526874 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 ||| | |||| | || |||| || || | || || ||| | || |||||| Sbjct 526875 GACTCTATAGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCACCAGACCAG 526934 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||||| || || | || || || || |||| ||| ||| | || |||| | Sbjct 526935 CAACGATTGATCTTCGCAGGAAAGCAGTTGGAGGATGGTCGTACTCTATCTGACTACAAC 526994 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 || ||||||||| | |||||||| || ||| | || ||||| || || Sbjct 526995 ATTCAGAAAGAGTCGACGCTTCACTTGGTGCTGCGTTTGCGTGGTGG 527041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418268823248000