Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20asiatica_20[genbank_20GCA_5F001693035.2_202016-09-02] 6,900 sequences; 168,679,183 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq126 84.2 1e-11 >seq126 Length=248068 Score = 84.2 bits (92), Expect = 1e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| ||||| |||||||||||||||||||||||| ||| ||||||||| || Sbjct 104304 GGCTCGAACCCTCGACATTCGCGTTATTAGCACGACGCTCTAACCGACTGAGCTATCCGG 104363 Query 11528 CCGTCGACGA 11537 || |||||| Sbjct 104364 CCACCGACGA 104373 Score = 84.2 bits (92), Expect = 1e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| ||||| |||||||||||||||||||||||| ||| ||||||||| || Sbjct 105523 GGCTCGAACCCTCGACATTCGCGTTATTAGCACGACGCTCTAACCGACTGAGCTATCCGG 105582 Query 11528 CCGTCGACGA 11537 || |||||| Sbjct 105583 CCACCGACGA 105592 Lambda K H 0.640 0.410 0.923 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261469210224400