Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20asiatica_20[genbank_20GCA_5F001693035.2_202016-09-02] 6,900 sequences; 168,679,183 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 8e-11 >seq1 Length=4220646 Score = 82.4 bits (90), Expect = 8e-11 Identities = 212/323 (66%), Gaps = 0/323 (0%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| | || || || || || || ||||| || || ||||||||| ||||| || Sbjct 1713477 GCCTCACCCACTCTTTTTAATGCTGGGACGCCTTACCCTCAGATGTCTAGCTGTTTTTTG 1713536 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | || | |||| |||| ||| || || | |||| ||||| | ||||| Sbjct 1713537 CTTACAATGAAGGACGACAGTATCGAGGGTATATATGACACGCTCAAACAATGTGCACTG 1713596 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||||| ||| ||||||| || ||||| ||| ||| ||| | | || || | | | Sbjct 1713597 ATCTCGAAAAACGCGGGTGGGATCGGTCTCAATGTTCACTGCATCCGAAGCAAGAATACG 1713656 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 | ||| || || ||||| ||||| || || || || ||||| |||||||||||| Sbjct 1713657 TTTATCGCTGGAACTAATGGGGAGTCCAATGGTCTTGTACCGATGCTTCGGGTCTTCAAC 1713716 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 | | | || || || || || ||||| || | | ||| | || || ||||| Sbjct 1713717 AGCACCGCTCGTTATGTCGATCAGGGAGGCAATAAACGACCCGGTGCCTTTGCCATCTAT 1713776 Query 94192 CTCGAGCCCTGGCACGCGGACGT 94214 ||||| || ||||| |||| || Sbjct 1713777 CTCGAACCATGGCATCCGGATGT 1713799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494680530124000