Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20asiatica_20[genbank_20GCA_5F001693035.2_202016-09-02] 6,900 sequences; 168,679,183 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq15 82.4 6e-11 >seq15 Length=1207391 Score = 82.4 bits (90), Expect = 6e-11 Identities = 110/152 (72%), Gaps = 1/152 (1%) Strand=Plus/Minus Query 28632 AAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCG 28691 ||||||||| || |||||||||||| | || ||||||||| | |||||||| || Sbjct 831767 AAGCAAAAA-TCCAAGACAAAGAGGGAATACCACCAGATCAACAACGGCTTATCTTCGCC 831709 Query 28692 GGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACT 28751 || || || ||||| || ||| | |||| ||||| |||||||| || || || Sbjct 831708 GGTAAGCAGTTGGAGGACGGGCGGACTCTCTCCGACTATAATATTCAAAAGGAGTCGACA 831649 Query 28752 CTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || || | || ||||| |||||||||| || Sbjct 831648 CTCCATCTTGTTCTAAGACTACGAGGAGGCAT 831617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425369026115100