Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20multiceps_20[genbank_20GCA_5F001923025.1_202016-12-28] 5,527 sequences; 240,089,990 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq137 95.1 1e-14 >seq137 Length=909340 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||||||||||||||||||| | |||||||| || || ||| | || || || |||| Sbjct 668240 ATGCAGATATTTGTTAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCGAGT 668181 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 ||| |||| | || |||| || || | || || ||| | || |||||| Sbjct 668180 GACTCGATAGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAG 668121 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||||| || || | ||| || || || |||| ||| || || ||| |||| | Sbjct 668120 CAACGCTTGATCTTTGCAGGAAAGCAGTTGGAGGATGGTCGCACGTTGTCCGACTACAAC 668061 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 || ||||| ||| | |||||||| || ||| | || ||||| || || Sbjct 668060 ATTCAGAAGGAGTCGACGCTTCACTTGGTGCTGCGTTTGCGTGGTGG 668014 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 24828 CATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATC 24887 |||||||||||| ||||| || || | ||||| || || || ||| |||| || || | Sbjct 675068 CATCATGCAGATCTTTGTGAAGACGCTTACCGGGAAGACTATCACCCTCGAGGTTGAGCC 675127 Query 24888 GAGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGA 24947 || || | || | ||| |||| || ||| | ||||| || | || || Sbjct 675128 TAGTGATTCGATTGAGAATGTGAAGGCCAAGATTCAAGACAAAGAGGGTATCCCACCAGA 675187 Query 24948 CCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTA 25007 |||||| ||||| || | ||| |||||||| |||||||| ||| | ||| || Sbjct 675188 CCAGCAGCGTTTGATCTTTGCTGGCAAACAGTTGGAAGATGGTCGCACTCTTTCCGACTA 675247 Query 25008 CAGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || ||| ||||| ||| | |||||||| || ||| | || ||||| || ||| Sbjct 675248 CAACATTCAGAAGGAGTCAACGCTTCACTTGGTGCTGCGTTTGCGTGGTGGT 675299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418275822911840