Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20multiceps_20[genbank_20GCA_5F001923025.1_202016-12-28] 5,527 sequences; 240,089,990 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq137 84.2 2e-11 >seq137 Length=909340 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 142981 ATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTG 143040 ||||| || || || ||||| ||||||||||| | |||| ||||| | ||| Sbjct 668493 ATGAAGCGTTGACTCCTTTTGAATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAATTG 668552 Query 143041 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTT 143100 ||||||||| |||||| ||| ||||| || || || |||||||| || || || || Sbjct 668553 CTTACCAGCAAAGATCAAACGCTGCTGGTCTGGTGGAATGCCTTCCTTATCTTGGATCTT 668612 Query 143101 TTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGT 143160 |||| | || | || || ||||||| ||||| | || | ||||||||||| Sbjct 668613 CGCCTTTACGTTCTCAATCGAATCGCTGGGTTCAACTTCTAGCGTTATGGTCTTGCCGGT 668672 Query 143161 CAATGTTTTTACGAATATTTGCAT 143184 | || || || || || ||||| Sbjct 668673 TAGAGTCTTGACAAAAATCTGCAT 668696 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 142981 ATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTG 143040 ||||| || || || ||||| ||||||||||| | |||| ||||| | ||| Sbjct 668721 ATGAAGCGTTGACTCCTTTTGAATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAATTG 668780 Query 143041 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTT 143100 ||||||||| |||||| ||| ||||| || || || |||||||| || || || || Sbjct 668781 CTTACCAGCAAAGATCAAACGCTGCTGGTCTGGTGGAATGCCTTCCTTATCTTGGATCTT 668840 Query 143101 TTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGT 143160 |||| | || | || || ||||||| ||||| | || | ||||||||||| Sbjct 668841 CGCCTTTACGTTCTCAATCGAATCGCTGGGTTCAACTTCTAGCGTTATGGTCTTGCCGGT 668900 Query 143161 CAATGTTTTTACGAATATTTGCAT 143184 | || || || || || ||||| Sbjct 668901 TAGAGTCTTGACAAAAATCTGCAT 668924 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||| || | ||| | || | |||| || || || ||||| |||||||| || Sbjct 657348 GCCTCCACGAAGACGAAGCACAAGGTGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGA 657407 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 || |||| ||||| | || || || ||| ||||||| ||||||||||| || || Sbjct 657408 CAAGGTGCGACCATCTTCCAACTGCTTTCCTGCAAAGATCAGGCGTTGCTGATCCGGTGG 657467 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||| || ||||| ||| ||| || | | || | || ||| |||| || || Sbjct 657468 AATGCCCTCCTTGTCTTGAATCTTTGCCTTCACATTCTCTATCGAGTCACTGGGCTCCAC 657527 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | || |||||||| | || || ||||| || ||||| Sbjct 657528 CTCCAGTGTGATTGTTTTGCCGGTTAGAGTCTTCACGAAGATCTGCAT 657575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506979371642640