Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20multiceps_20[genbank_20GCA_5F001923025.1_202016-12-28] 5,527 sequences; 240,089,990 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq5 100 5e-16 >seq5 Length=4770536 Score = 100 bits (110), Expect = 5e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| ||||| ||| |||| | |||||| || || ||||| ||| |||| ||| ||| Sbjct 3307390 GCATGCAAAATCCGTGTGGAGGCCTTCATCTCGACTGATCAGCTCGTTACTAAAGGTGAG 3307331 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 |||||||||| || | || ||||||||||| || | || || || ||||| ||||| Sbjct 3307330 GCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAATGAACCAGAAAAGAA 3307271 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 | ||| || | || |||||||| || | ||| || | | || || || | | Sbjct 3307270 TACGCCTTCGATAGCAGCGAACGCCACCAGACGCTCCGCGTACGGTGCCTTTTTATTCGC 3307211 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTT 48339 ||||| ||||||||| || |||||||| Sbjct 3307210 AATCCACCTAAGCGCCCAATCGGCCTTCTT 3307181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931468442727680