Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20multiceps_20[genbank_20GCA_5F001923025.1_202016-12-28] 5,527 sequences; 240,089,990 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq9 82.4 6e-11 >seq9 Length=3474131 Score = 82.4 bits (90), Expect = 6e-11 Identities = 110/152 (72%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 28632 AAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCG 28691 ||||||||| || |||||||||||| | || ||||||||| | |||||||| || Sbjct 2738339 AAGCAAAAA-TCCAAGACAAAGAGGGAATACCACCAGATCAACAACGGCTTATCTTCGCC 2738397 Query 28692 GGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACT 28751 || || || ||||| || ||| | | |||||||| |||||||| || || || Sbjct 2738398 GGTAAGCAGTTGGAGGACGGGCGGACTCTCTCTGATTATAATATTCAAAAGGAGTCGACA 2738457 Query 28752 CTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || || | || ||||| |||||||||| || Sbjct 2738458 CTCCATCTTGTTCTAAGACTACGAGGAGGCAT 2738489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425376144599733