Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20multiceps_20[genbank_20GCA_5F001923025.1_202016-12-28] 5,527 sequences; 240,089,990 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq9 104 3e-17 >seq9 Length=3474131 Score = 104 bits (114), Expect = 3e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| |||| || | ||||||||||| || || | || || || Sbjct 2738259 AATGCAAATTTTTGTTAAGACTCTCACTGGAAAAACCATAACCCTTGAGGTTGAGCCAAG 2738318 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 |||| ||| ||||| ||| ||||| ||||| ||||| || ||||| ||||| || Sbjct 2738319 TGATTCCATTGAGAACGTAAAAGCAAAAATCCAAGACAAAGAGGGAATACCACCAGATCA 2738378 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||| | | || | |||||||||||| | || || | ||| | || |||||||| Sbjct 2738379 ACAACGGCTTATCTTCGCCGGTAAGCAGTTGGAGGACGGGCGGACTCTCTCTGATTATAA 2738438 Query 156002 TATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 ||| || ||| ||| |||| || ||| | || ||||| || |||| || Sbjct 2738439 TAT-TCAAAAGGAGTCGACACTCCATCTTGTTCTAAGACTACGAGGAGG 2738486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731821436793200