Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20multiceps_20[genbank_20GCA_5F001923025.1_202016-12-28] 5,527 sequences; 240,089,990 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 2e-15 >seq3 Length=4840458 Score = 98.7 bits (108), Expect = 2e-15 Identities = 134/186 (72%), Gaps = 6/186 (3%) Strand=Plus/Minus Query 304885 TTTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGC---AGGC 304941 ||||||||||||| | ||||| || || || || || ||| | || | ||| |||| Sbjct 295702 TTTACAATATCATGTGGCAACCTTGATTGACAACGATATTCCCGG---TTTGCCAAAGGC 295646 Query 304942 ATCTCAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGG 305001 | ||| | ||||| |||||| ||||| |||| ||||||| | ||||| || | || Sbjct 295645 AATTCAGAAGTCTGGAAGACCTCTAAAGTCAATTAAGCAACGCCTAAAAGGAAAGGCCGG 295586 Query 305002 TCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCAC 305061 || || |||||||| | ||||| || |||||||||||| || ||| ||| || || Sbjct 295585 ACGCATACGAGGTAACTTGATGGGGAAGCGTGTTGATTTTTCCGCTCGAACTGTTATAAC 295526 Query 305062 ACCTGA 305067 |||| Sbjct 295525 TGCTGA 295520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186728756222447