Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20multiceps_20[genbank_20GCA_5F001923025.1_202016-12-28] 5,527 sequences; 240,089,990 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq5 87.8 6e-12 >seq5 Length=4770536 Score = 87.8 bits (96), Expect = 6e-12 Identities = 101/135 (75%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 443706 GAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTC 443765 ||||| || || || || |||| ||||||| | || ||| || ||| || || Sbjct 3307235 GAGCGTCTGGTGGCGTTCGCTGCTATCGAAGGCGTATTCTTTTCTGGTTCATTT-GCTTC 3307293 Query 443766 CATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGAT 443825 |||||||||| | || |||||||| || |||| || || |||||||||||||| ||||| Sbjct 3307294 CATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCCTCACCTTTAGTAACGAGCTGAT 3307353 Query 443826 CAGTCGGGACGAGGG 443840 |||||| || || || Sbjct 3307354 CAGTCGAGATGAAGG 3307368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588223522482515