Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20saginata_20[genbank_20GCA_5F001693075.2_202016-10-23] 3,626 sequences; 169,104,283 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq32 86.0 5e-12 >seq32 Length=1043406 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||||||||||||||||||| | |||||||| || || ||| | || || || | || Sbjct 738562 ATGCAGATATTTGTTAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCCAGT 738621 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 ||| |||| | || |||| || || | || || ||| | || |||||| Sbjct 738622 GACTCGATAGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCACCAGACCAG 738681 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||||| || || | || || || || |||| ||| ||| | || |||| | Sbjct 738682 CAACGATTGATCTTCGCAGGAAAGCAGTTGGAGGATGGTCGTACTCTATCTGACTACAAC 738741 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 || ||||||||| | |||||||| || ||| | || ||||| || || Sbjct 738742 ATTCAGAAAGAGTCGACGCTTCACTTGGTGCTGCGTTTGCGTGGTGG 738788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418285514361920