Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20saginata_20[genbank_20GCA_5F001693075.2_202016-10-23]
3,626 sequences; 169,104,283 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq32 86.0 5e-12
seq12 84.2 2e-11
>seq32
Length=1043406
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||||||||||| ||||| || || || || || ||||| | || ||| |||||
Sbjct 737650 ATGCAAATTTTTGTGAAAACTCTAACCGGCAAGACAATTACGCTGGAGGTGGAACCCAGC 737709
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| ||| | || || || ||| || || || ||| | || || |||
Sbjct 737710 GACACAATTGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCACCGGACCAG 737769
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
||| | || || | |||||| || || || ||||||| ||| || | || ||||||
Sbjct 737770 CAACGTCTAATCTTTGCGGGGAAGCAGTTGGAAGATGGTCGCACCCTGTCTGACTATAAC 737829
Query 115466 ATTCAAAAAGAGTCTAC 115482
|||||||| ||||| ||
Sbjct 737830 ATTCAAAAGGAGTCAAC 737846
>seq12
Length=1725783
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341
|| ||||||||||||||| || || ||||| ||||||||||| ||| | || ||| |
Sbjct 1076819 AATAATGCAAATTTTTGTTAAGACTCTCACTGGAAAAACCATAACCCTTGAGGTTGAGCC 1076878
Query 115342 CAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
|| || | ||| | |||||| |||||| || ||||| || | || ||
Sbjct 1076879 AAGTGATTCCATTGAGAACGTAAAAGCAAAAATCCAAGACAAAGAGGGAATACCACCAGA 1076938
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
||| ||| | ||||| | || || || || || || || | || | |||| ||
Sbjct 1076939 TCAACAACGGCTTATCTTCGCCGGTAAGCAGTTGGAGGACGGGCGGACTCTCTCCGACTA 1076998
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||| |||||||| ||||| || | ||| | || | ||| | ||||||||
Sbjct 1076999 TAATATTCAAAAGGAGTCGACACTCCATCTTGTTCTAAGACTACGAGGAGG 1077049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425325203251120
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |