Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20saginata_20[genbank_20GCA_5F001693075.2_202016-10-23] 3,626 sequences; 169,104,283 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq10 122 2e-22 >seq10 Length=2030774 Score = 122 bits (134), Expect = 2e-22 Identities = 292/437 (67%), Gaps = 6/437 (1%) Strand=Plus/Minus Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 |||| |||||||| ||| ||| ||||| || ||||| || || | | || | Sbjct 443589 TGGCTTTCTTCGCGGCCAGTGATGGCATCGTTAATGAAAATCTAACTTTGAATTTTTGTA 443530 Query 42484 AAGAGGTGCAGTACTTT--GAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAA 42541 | ||||| || | || ||||| || || || || || | || | ||| |||| || Sbjct 443529 ACGAGGTCCA--AATTCCCGAGGCTCGTTGTTTTTATGGAATGCAAGTCGCCGTAGAAAA 443472 Query 42542 CGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCG 42601 | | || ||||| ||||| | ||| | | || ||| | |||||| || || || Sbjct 443471 CATTCATTCTGAAATGTACTCTCTTCTGATTGATACCTACGTAAAGGATCCGGTAGAACG 443412 Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661 || ||||| || ||||| | ||| |||| || | |||||||| || ||||| Sbjct 443411 CGACTTTCTGTTTAACGCCATTCAAACGTTGCCGTGTGTTGCTAAGAAGGCCGATTGGGC 443352 Query 42662 GCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGC 42721 || | ||||| | | | | ||| ||| || ||| | ||||| || || | || Sbjct 443351 TCTTAGGTGGATTGCAAATAAAAAGGCACCGTACGCGGAGCGTCTGGTGGCGTTCGCTGC 443292 Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGG 42780 | |||||| | ||||| || || | || || |||||||||||||||||| || || Sbjct 443291 TATTGAGGGCGTATTCTTTTCTGGTTCATTTGCTTCCATCTTCTGGCTCAAGAAGCGTGG 443232 Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840 | || ||||| || |||||||| ||||| || ||||| | || || || || || | Sbjct 443231 TCTC-ATGCCTGGCCTCACCTTTAGTAACGAGCTGATCAGTCGAGATGAAGGCCTCCACA 443173 Query 42841 GGGACTTTGCCTGCCTC 42857 ||| ||||| |||||| Sbjct 443172 CGGATTTTGCATGCCTC 443156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944296397825760