Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20saginata_20[genbank_20GCA_5F001693075.2_202016-10-23] 3,626 sequences; 169,104,283 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq10 141 1e-27 seq371 138 2e-26 seq197 138 2e-26 seq1628 132 8e-25 seq822 132 8e-25 seq511 129 9e-24 seq406 129 9e-24 seq387 129 9e-24 seq353 129 9e-24 seq123 120 5e-21 >seq10 Length=2030774 Score = 141 bits (156), Expect = 1e-27 Identities = 232/330 (70%), Gaps = 11/330 (3%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||| || |||||||||| ||||| |||||| |||||| |||||||| || |||||| Sbjct 443181 CCTTCATCTCGACTGATCAGCTCGTTACTAAAGGTGAGGCCAGGCATGAGACCACGCTTC 443240 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTG--CCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458 |||||||| ||||||| || || || || || || || | |||||| | || || | Sbjct 443241 TTGAGCCAGAAGATGG--AAGCAAATGAACCAGAAAAGAATACGCCCTCAATAGCAGCGA 443298 Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTG--ATCCACTTCATCGC 794516 | | || || ||||| || | | || ||| | || ||| |||||| | | || Sbjct 443299 ACGCCACCAGACGCTCCGCGTACG-GT----GCCTTTTTATTTGCAATCCACCTAAGAGC 443353 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 794576 ||| || ||||| || || | |||| ||| | |||||| ||| || ||| Sbjct 443354 CCAATCGGCCTTCTTAGCAACACACGGCAACGTTTGAATGGCGTTAAACAGAAAGTCGCG 443413 Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636 || ||||| ||||| |||||||| || || || || ||||| | || || || ||||| Sbjct 443414 TTCTACCGGATCCTTTACGTAGGTATCAATCAGAAGAGAGTACATTTCAGAATGAATGTT 443473 Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 ||| | ||||| || | |||||||| || Sbjct 443474 TTCTACGGCGACTTGCATTCCATAAAAACA 443503 >seq371 Length=72635 Score = 138 bits (152), Expect = 2e-26 Identities = 175/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || ||||| || ||||| || || |||||| | |||| || || ||| Sbjct 46480 TGTACTTGGTCACAGCCTTCGTGCCCTCCGACACCGCGTGCTTCGCCAACTCACCCGGCA 46539 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| ||||| || ||||| ||||| ||| | ||| || |||||| | Sbjct 46540 GCAGCAGACGCACTGCAGTCTGAATCTCTCGGCTCGTGATAGTCGACTTCTTGTTGTAGT 46599 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| || | | ||||| | | || || |||| |||||||| || || ||||||| Sbjct 46600 GCGCCAACCGACTCGACTCGGCGGCAATTCGCTCGAAGATGTCGTTCACGAAGGAGTTCA 46659 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||||||||||| || ||||||||| ||| ||||||||||| |||||||||| Sbjct 46660 TGATCGACATCGCCTTCGACGAGATGCCCGTGTCCGGGTGCACCTGGCGCAGCACCTTGT 46719 Query 1485710 A 1485710 | Sbjct 46720 A 46720 Score = 132 bits (146), Expect = 8e-25 Identities = 174/241 (72%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || ||||| || ||||| || || |||||| | |||| || || ||| Sbjct 14269 TGTACTTGGTCACAGCCTTCGTGCCCTCCGACACCGCGTGCTTCGCCAACTCACCCGGCA 14210 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| ||||| || ||||| ||||| || | ||| || |||||| | Sbjct 14209 GCAGCAGACGCACTGCAGTCTGAATCTCTCGACTCGTGATAGTCGACTTCTTGTTGTAGT 14150 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| || | | ||||| | | || || |||| |||||||| || || ||||||| Sbjct 14149 GCGCCAACCGACTCGACTCGGCGGCAATTCGCTCGAAGATGTCGTTCACGAAGGAGTTCA 14090 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||||||||||| || ||||||||| ||| ||||||||||| |||||||||| Sbjct 14089 TGATCGACATCGCCTTCGACGAGATGCCCGTGTCCGGGTGCACCTGGCGCAGCACCTTGT 14030 Query 1485710 A 1485710 | Sbjct 14029 A 14029 >seq197 Length=134788 Score = 138 bits (152), Expect = 2e-26 Identities = 175/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || ||||| || ||||| || || |||||| | |||| || || ||| Sbjct 823 TGTACTTGGTCACAGCCTTCGTGCCCTCCGACACTGCGTGCTTCGCCAACTCACCCGGCA 764 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| ||||| || ||||| ||||| ||| | ||| || |||||| | Sbjct 763 GCAGCAGACGCACTGCAGTCTGAATCTCTCGGCTCGTGATAGTCGACTTCTTGTTGTAGT 704 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| || | | ||||| | | || || |||| |||||||| || || ||||||| Sbjct 703 GCGCCAACCGACTCGACTCGGCGGCAATTCGCTCGAAGATGTCGTTCACGAAGGAGTTCA 644 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||||||||||| || ||||||||| ||| ||||||||||| |||||||||| Sbjct 643 TGATCGACATCGCCTTCGACGAGATGCCCGTGTCCGGGTGCACCTGGCGCAGCACCTTGT 584 Query 1485710 A 1485710 | Sbjct 583 A 583 Score = 138 bits (152), Expect = 2e-26 Identities = 175/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || ||||| || ||||| || || |||||| | |||| || || ||| Sbjct 14997 TGTACTTGGTCACAGCCTTCGTGCCCTCCGACACTGCGTGCTTCGCCAACTCACCCGGCA 15056 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| ||||| || ||||| ||||| ||| | ||| || |||||| | Sbjct 15057 GCAGCAGACGCACTGCAGTCTGAATCTCTCGGCTCGTGATAGTCGACTTCTTGTTGTAGT 15116 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| || | | ||||| | | || || |||| |||||||| || || ||||||| Sbjct 15117 GCGCCAACCGACTCGACTCGGCGGCAATTCGCTCGAAGATGTCGTTCACGAAGGAGTTCA 15176 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||||||||||| || ||||||||| ||| ||||||||||| |||||||||| Sbjct 15177 TGATCGACATCGCCTTCGACGAGATGCCCGTGTCCGGGTGCACCTGGCGCAGCACCTTGT 15236 Query 1485710 A 1485710 | Sbjct 15237 A 15237 >seq1628 Length=5716 Score = 132 bits (146), Expect = 8e-25 Identities = 174/241 (72%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || ||||| || ||||| || || |||||| | |||| || || ||| Sbjct 769 TGTACTTGGTCACAGCCTTCGTGCCCTCCGACACCGCGTGCTTCGCCAACTCACCCGGCA 828 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| ||||| || ||||| ||||| || | ||| || |||||| | Sbjct 829 GCAGCAGACGCACTGCAGTCTGAATCTCTCGACTCGTGATAGTCGACTTCTTGTTGTAGT 888 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| || | | ||||| | | || || |||| |||||||| || || ||||||| Sbjct 889 GCGCCAACCGACTCGACTCGGCGGCAATTCGCTCGAAGATGTCGTTCACGAAGGAGTTCA 948 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||||||||||| || ||||||||| ||| ||||||||||| |||||||||| Sbjct 949 TGATCGACATCGCCTTCGACGAGATGCCCGTGTCCGGGTGCACCTGGCGCAGCACCTTGT 1008 Query 1485710 A 1485710 | Sbjct 1009 A 1009 >seq822 Length=24677 Score = 132 bits (146), Expect = 8e-25 Identities = 174/241 (72%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || ||||| || ||||| || || |||||| | |||| || || ||| Sbjct 16562 TGTACTTGGTCACAGCCTTCGTGCCCTCCGACACCGCGTGCTTCGCCAACTCACCCGGCA 16503 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| ||||| || ||||| ||||| || | ||| || |||||| | Sbjct 16502 GCAGCAGACGCACTGCAGTCTGAATCTCTCGACTCGTGATAGTCGACTTCTTGTTGTAGT 16443 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| || | | ||||| | | || || |||| |||||||| || || ||||||| Sbjct 16442 GCGCCAACCGACTCGACTCGGCGGCAATTCGCTCGAAGATGTCGTTCACGAAGGAGTTCA 16383 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||||||||||| || ||||||||| ||| ||||||||||| |||||||||| Sbjct 16382 TGATCGACATCGCCTTCGACGAGATGCCCGTGTCCGGGTGCACCTGGCGCAGCACCTTGT 16323 Query 1485710 A 1485710 | Sbjct 16322 A 16322 >seq511 Length=51389 Score = 129 bits (142), Expect = 9e-24 Identities = 173/241 (72%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || |||||||| ||||| || || |||||| | |||| || || ||| Sbjct 30067 TGTACTTGGTCACAGCCTTGGTGCCCTCCGACACCGCGTGCTTCGCCAACTCACCCGGCA 30008 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| ||||| || ||||| ||||| | | | ||| || |||||| Sbjct 30007 GCAGCAGACGCACAGCAGTCTGAATCTCTCTGCTCGTGATTGTCGACTTCTTGTTGTAAT 29948 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| || | | ||||| | | ||||| |||| |||||||| || || ||||||| Sbjct 29947 GCGCCAACCGACTCGACTCGGCGGCAATGCGCTCGAAGATGTCGTTCACGAAGGAGTTCA 29888 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 | |||||||||| || ||||||||| ||| || |||||||| |||||||||| Sbjct 29887 TTATCGACATCGCCTTCGACGAGATGCCCGTGTCAGGATGCACCTGACGCAGCACCTTGT 29828 Query 1485710 A 1485710 | Sbjct 29827 A 29827 >seq406 Length=65694 Score = 129 bits (142), Expect = 9e-24 Identities = 173/241 (72%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || |||||||| ||||| || || |||||| | |||| || || ||| Sbjct 61322 TGTACTTGGTCACAGCCTTGGTGCCCTCCGACACCGCGTGCTTCGCCAACTCACCCGGCA 61263 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| ||||| || ||||| ||||| | | | ||| || |||||| Sbjct 61262 GCAGCAGACGCACAGCAGTCTGAATCTCTCTGCTCGTGATTGTCGACTTCTTGTTGTAAT 61203 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| || | | ||||| | | ||||| |||| |||||||| || || ||||||| Sbjct 61202 GCGCCAACCGACTCGACTCGGCGGCAATGCGCTCGAAGATGTCGTTCACGAAGGAGTTCA 61143 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 | |||||||||| || ||||||||| ||| || |||||||| |||||||||| Sbjct 61142 TTATCGACATCGCCTTCGACGAGATGCCCGTGTCAGGATGCACCTGACGCAGCACCTTGT 61083 Query 1485710 A 1485710 | Sbjct 61082 A 61082 >seq387 Length=69685 Score = 129 bits (142), Expect = 9e-24 Identities = 173/241 (72%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || |||||||| ||||| || || |||||| | |||| || || ||| Sbjct 4942 TGTACTTGGTCACAGCCTTGGTGCCCTCCGACACCGCGTGCTTCGCCAACTCACCCGGCA 4883 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| ||||| || ||||| ||||| | | | ||| || |||||| Sbjct 4882 GCAGCAGACGCACAGCAGTCTGAATCTCTCTGCTCGTGATTGTCGACTTCTTGTTGTAAT 4823 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| || | | ||||| | | ||||| |||| |||||||| || || ||||||| Sbjct 4822 GCGCCAACCGACTCGACTCGGCGGCAATGCGCTCGAAGATGTCGTTCACGAAGGAGTTCA 4763 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 | |||||||||| || ||||||||| ||| || |||||||| |||||||||| Sbjct 4762 TTATCGACATCGCCTTCGACGAGATGCCCGTGTCAGGATGCACCTGACGCAGCACCTTGT 4703 Query 1485710 A 1485710 | Sbjct 4702 A 4702 >seq353 Length=77991 Score = 129 bits (142), Expect = 9e-24 Identities = 173/241 (72%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || |||||||| ||||| || || |||||| | |||| || || ||| Sbjct 40922 TGTACTTGGTCACAGCCTTGGTGCCCTCCGACACCGCGTGCTTCGCCAACTCACCCGGCA 40981 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| ||||| || ||||| ||||| | | | ||| || |||||| Sbjct 40982 GCAGCAGACGCACAGCAGTCTGAATCTCTCTGCTCGTGATTGTCGACTTCTTGTTGTAAT 41041 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| || | | ||||| | | ||||| |||| |||||||| || || ||||||| Sbjct 41042 GCGCCAACCGACTCGACTCGGCGGCAATGCGCTCGAAGATGTCGTTCACGAAGGAGTTCA 41101 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 | |||||||||| || ||||||||| ||| || |||||||| |||||||||| Sbjct 41102 TTATCGACATCGCCTTCGACGAGATGCCCGTGTCAGGATGCACCTGACGCAGCACCTTGT 41161 Query 1485710 A 1485710 | Sbjct 41162 A 41162 >seq123 Length=229434 Score = 120 bits (132), Expect = 5e-21 Identities = 162/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || |||||||| ||||| || || |||||| | |||| || ||| ||| Sbjct 190291 TGTACTTGGTCACAGCCTTGGTGCCCTCCGACACCGCGTGCTTAGCCAACTCACCGGGCA 190232 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| ||||| || ||||||||||| | | ||| || |||||| Sbjct 190231 GCAGCAGACGCACAGCAGTCTGGATCTCTCTACTCGTGATTGTCGATTTCTTGTTGTAAT 190172 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| |||| | |||| | | || || |||| ||||| || || || ||||||| Sbjct 190171 GCGCCAAACGGCTCGATTCGGCGGCAATCCGCTCGAAGATGTCATTCACGAAGGAGTTCA 190112 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1485695 |||||||||||| || ||||||||| ||| |||||||| || Sbjct 190111 TGATCGACATCGCCTTCGATGAGATGCCCGTGTCTGGGTGCACTTG 190066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915860685841814