Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20saginata_20[genbank_20GCA_5F001693075.2_202016-10-23] 3,626 sequences; 169,104,283 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq32 158 8e-34 seq12 131 1e-25 seq3 98.7 6e-16 >seq32 Length=1043406 Score = 158 bits (174), Expect = 8e-34 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | ||| | ||| |||| ||||| || ||| ||||||||||| ||||| ||| Sbjct 738788 CCACCACGCAAACGCAGCACCAAGTGAAGCGTCGACTCTTTCTGAATGTTGTAGTCAGAT 738729 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || |||| |||| |||||||| |||||||||| ||||||||||||| | || Sbjct 738728 AGAGTACGACCATCCTCCAACTGCTTTCCTGCGAAGATCAATCGTTGCTGGTCTGGTGGA 738669 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || || ||| ||||||| ||| ||| ||| || Sbjct 738668 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCTATCGAGTCACTGGGCTCCACC 738609 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| || |||||||| || ||||| |||||||| Sbjct 738608 TCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTAACAAATATCTGCAT 738562 Score = 143 bits (158), Expect = 2e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| |||| |||||| || ||||| ||||| |||||| |||| |||| Sbjct 749225 AGCACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGATAGGGTGCGGCCATCT 749166 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || |||||||||| ||||||||||||| | || | ||||||||||| Sbjct 749165 TCCAACTGCTTGCCAGCGAAGATCAATCGTTGCTGGTCTGGAGGAATGCCCTCCTTGTCC 749106 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| || ||| | ||||| ||| ||| ||| || || | || || || Sbjct 749105 TGGATCTTTGCCTTCACGTTCTCAATCGAGTCACTGGGCTCCACCTCCAGTGTGATTGTT 749046 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || ||||| || ||||||||||| Sbjct 749045 TTGCCGGTTAGAGTCTTCACGAAGATCTGCAT 749014 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||| |||||||| ||||| ||||| || | |||| |||| Sbjct 730884 AGCACAAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAATGTGCGACCATCT 730943 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || |||||||||| |||||| |||||| | || | ||||||||||| Sbjct 730944 TCCAACTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCC 731003 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| || ||| | ||||| ||| | | ||| || || | ||| || ||| Sbjct 731004 TGGATCTTTGCCTTCACGTTCTCAATCGAATCACTAGGCTCAACCTCGAGGGTGATAGTC 731063 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || |||||||| ||||||||||| Sbjct 731064 TTCCCGGTAAGAGTCTTTACGAAGATCTGCAT 731095 Score = 123 bits (136), Expect = 2e-23 Identities = 157/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||| |||||||||||||| ||||| || | |||| |||| Sbjct 739685 AGCACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGACAATGTGCGACCATCT 739626 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || |||||||||| |||||| |||||| | || | ||||| ||||| Sbjct 739625 TCCAACTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGGATGCCCTCTTTGTCT 739566 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || || || || || ||||| ||| | | ||| || || | ||| || | Sbjct 739565 TGAATCTTGGCCTTCAC--ATTCTCAATCGAATCACTAGGCTCAACCTCGAGGGTGATAG 739508 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || || |||||||| ||||||||||| Sbjct 739507 TCTTCCCGGTAAGAGTCTTTACGAAGATCTGCAT 739474 Score = 118 bits (130), Expect = 7e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| || ||| ||||| ||||| ||||| || | |||| |||| Sbjct 731112 AGCACCAAGTGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGACAACGTGCGACCATCC 731171 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||||| || ||||||| |||||||||||| | || | ||||||||||| Sbjct 731172 TCCAACTGCTTTCCTGCAAAGATCAATCGTTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 731231 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| ||||||| ||| | | ||| || || | || || ||| Sbjct 731232 TGGATCTTCGCCTTCACGTTCTCTATCGAGTCACTTGGCTCCACCTCCAACGTAATTGTC 731291 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || || ||||| ||||| ||||||||| Sbjct 731292 TTCCCAGTCAGCGTCTTCACAAATATCTGCATG 731324 Score = 118 bits (130), Expect = 7e-22 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| |||||||| ||||| || || |||| |||| |||| |||||| || || || Sbjct 738297 CTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCTTCCAATTGCTTACCAGCAAA 738238 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || ||||||||| | || | || ||||| || | || || || ||| Sbjct 738237 GATCAAACGCTGCTGGTCTGGTGGAATGCCTTCCTTATCTTGGATCTTCGCCTTTACGTT 738178 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | ||||| ||| ||| || || || | ||||||||||| || || || ||||| || Sbjct 738177 CTCAATCGAATCACTGGGTTCAACTTCTAGCGTTATGGTCTTGCCGGTTAGAGTCTTGAC 738118 Query 34966 AAAGATCTGCATG 34978 ||||||||||||| Sbjct 738117 AAAGATCTGCATG 738105 Score = 118 bits (130), Expect = 7e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| || ||| ||||| ||||| ||||| || | |||| |||| Sbjct 739457 AGCACCAAGTGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGACAACGTGCGACCATCC 739398 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||||| || ||||||| |||||||||||| | || | ||||||||||| Sbjct 739397 TCCAACTGCTTTCCTGCAAAGATCAATCGTTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 739338 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| ||||||| ||| | | ||| || || | || || ||| Sbjct 739337 TGGATCTTCGCCTTCACGTTCTCTATCGAGTCACTTGGCTCCACCTCCAACGTAATTGTC 739278 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || || ||||| ||||| ||||||||| Sbjct 739277 TTCCCAGTCAGCGTCTTCACAAATATCTGCATG 739245 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| |||||||| ||||| || || |||| |||| |||| |||||| || || || Sbjct 738069 CTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCTTCCAATTGCTTACCAGCAAA 738010 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || ||||||||| | || | |||||||| || | || || || ||| Sbjct 738009 GATCAAACGCTGCTGGTCTGGTGGAATGCCCTCCTTATCTTGGATCTTCGCCTTTACGTT 737950 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | ||||| || ||| || || || | ||||||||||| || || || ||||| || Sbjct 737949 CTCAATCGAATCGCTGGGTTCAACTTCTAGCGTTATGGTCTTGCCGGTTAGAGTCTTGAC 737890 Query 34966 AAAGATCTGCAT 34977 ||| |||||||| Sbjct 737889 AAAAATCTGCAT 737878 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || |||| ||| ||||| || ||||| ||||| || | | |||| |||| Sbjct 748769 AGCACAAGATGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTGCGACCATCT 748710 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||||| || |||||||| |||||||| ||| | || | ||||||||||| Sbjct 748709 TCCAACTGCTTTCCCGCAAAGATCAGGCGTTGCTGATCTGGTGGAATGCCCTCCTTGTCC 748650 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| || || ||||||| ||| ||| ||| || || | || || || Sbjct 748649 TGAATCTTTGCCTTCACATTCTCTATCGAGTCACTGGGCTCCACCTCCAGTGTGATTGTT 748590 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | ||||| || ||||| ||||| Sbjct 748589 TTGCCAGTCAAAGTCTTCACGAAGATTTGCAT 748558 Score = 105 bits (116), Expect = 4e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| |||||||| || || || || |||| | || |||| ||||| || ||||| Sbjct 738525 CTCCTTTTGAATGTTGTAATCAGAAAGAGTGCGACCGTCTTCCAACTGCTTACCAGCGAA 738466 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| || || || ||| |||| | |||||||| || | || || || ||| Sbjct 738465 AATCAAACGCTGTTGATCTGGCGGAATGCCCTCCTTATCTTGGATCTTCGCCTTTACGTT 738406 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | ||||| ||| ||| || || || | ||||||||||| || || || ||||| || Sbjct 738405 CTCAATCGAATCACTGGGTTCAACTTCTAGCGTTATGGTCTTGCCGGTTAGAGTCTTGAC 738346 Query 34966 AAAGATCTGCATG 34978 ||||||||||||| Sbjct 738345 AAAGATCTGCATG 738333 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||| |||||| |||||||||||||| || ||| |||| |||| Sbjct 737861 AGCACAAGGTGGAGGGTTGACTCCTTTTGAATGTTATAGTCAGACAGGGTGCGACCATCT 737802 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || || ||||| || ||||||||||| | || | ||||||||||| Sbjct 737801 TCCAACTGCTTCCCCGCAAAGATTAGACGTTGCTGGTCCGGTGGAATGCCCTCCTTGTCT 737742 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || || || || || || | || ||| || || || | || || | Sbjct 737741 TGAATCTTCGCCTTCAC--ATTCTCAATTGTGTCGCTGGGTTCCACCTCCAGCGTAATTG 737684 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || || || || ||||| || ||||| Sbjct 737683 TCTTGCCGGTTAGAGTTTTCACAAAAATTTGCAT 737650 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| || |||||| |||||||| ||||| || || | || | || Sbjct 739229 AGCACTAGGTGAAGCGTTGACTCCTTTTGAATGTTGTAGTCGGAAAGAGTCCGACCGTCC 739170 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| || || || || ||||||| || ||||| || | || | ||||| ||||| Sbjct 739169 TCCAACTGTTTGCCAGCAAAGATCAAACGCTGCTGATCCGGTGGGATACCCTCTTTGTCT 739110 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || || || || || ||||| ||| | | ||| || || | ||| || | Sbjct 739109 TGAATCTTGGCCTTCAC--ATTCTCAATCGAATCACTAGGCTCAACCTCGAGGGTGATAG 739052 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || || |||||||| ||||||||||| Sbjct 739051 TCTTCCCGGTAAGAGTCTTTACGAAGATCTGCAT 739018 Score = 89.7 bits (98), Expect = 3e-13 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||| |||||||||||||| ||||| |||||| | || |||| Sbjct 739001 AGCACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGATAGGGTACGACCATCC 738942 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || |||||||||| || ||||| || |||| | |||||||| || Sbjct 738941 TCCAACTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGCGGAATACCCTCCTTATCC 738882 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || || || || || || | || | | || || || | || || | Sbjct 738881 TGAATCTTGGCCTTCAC--ATTCTCAATTGTGTCGCTAGGTTCCACTTCCAGCGTAATAG 738824 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || || || ||||| || || || |||||| Sbjct 738823 TCTTCCCAGTCAGCGTCTTCACGAATATTTGCATG 738789 >seq12 Length=1725783 Score = 131 bits (144), Expect = 1e-25 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| ||||| |||||||| || || | ||| | || |||| ||||| |||||||| Sbjct 1077014 CTCCTTTTGAATATTATAGTCGGAGAGAGTCCGCCCGTCCTCCAACTGCTTACCGGCGAA 1076955 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || ||||| || ||| | || | ||||| ||||| | |||||| ||| ||| Sbjct 1076954 GATAAGCCGTTGTTGATCTGGTGGTATTCCCTCTTTGTCTTGGATTTTTGCTTTTACGTT 1076895 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || || ||| | | ||| || |||| ||||||||| ||||| ||||| ||||| || Sbjct 1076894 CTCAATGGAATCACTTGGCTCAACCTCAAGGGTTATGGTTTTTCCAGTGAGAGTCTTAAC 1076835 Query 34966 AAAGATCTGCATGAT 34980 ||| || ||||| || Sbjct 1076834 AAAAATTTGCATTAT 1076820 >seq3 Length=2943993 Score = 98.7 bits (108), Expect = 6e-16 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||| |||||||||||| || || || |||| | || |||| Sbjct 307570 AGCACAAGGTGAAGGGTTGACTCCTTCTGAATATTGTAATCAGATAAGGAACGTCCATCC 307629 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||| || || || || || || || |||||| | || | |||||||||||| Sbjct 307630 TCCAATTGCTTGCCAGCAAAAATAAGACGCTGTTGGTCTGGTGGAATCCCCTCCTTGTCT 307689 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || || || || || || || || || |||||| |||| || || | Sbjct 307690 TGAATCTTAGCCTTCAC--ATTCTCAATAGAATCGGAGGGCTCGACCTCAAGAGTGATAG 307747 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || || || || || || ||||| ||||||||| Sbjct 307748 TTTTGCCGGTAAGAGTTTTCACAAAAATCTGCATG 307782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325678407024494