Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20saginata_20[genbank_20GCA_5F001693075.2_202016-10-23] 3,626 sequences; 169,104,283 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq508 82.4 2e-12 seq201 82.4 2e-12 seq170 78.8 3e-11 >seq508 Length=51575 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||| ||||| ||||| | |||||| Sbjct 33583 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGATCCCGGG 33526 >seq201 Length=128677 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 ||| |||||||||||||| |||||||||||||||||| ||||||||||| | |||||| Sbjct 30860 TAGGTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCTATCCCGGG 30917 >seq170 Length=151419 Score = 78.8 bits (86), Expect = 3e-11 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||| ||||||||| |||||||||||||||||| ||||| ||||| | |||||| Sbjct 38774 TAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGAACCCGGG 38717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15848971414770