Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20saginata_20[genbank_20GCA_5F001693075.2_202016-10-23] 3,626 sequences; 169,104,283 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq32 95.1 1e-14 >seq32 Length=1043406 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || ||||| ||| ||||| || || || |||| ||| || || |||| || | |||| Sbjct 731349 TGAAGCGTTGACTCCTTTTGAATGTTGTAGTCGGAAAGAGTCCGACCGTCCTCCAACTGT 731408 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||||| ||||| || | ||||||||| || |||||| | | ||||||||| || || Sbjct 731409 TTGCCAGCAAAGATCAAACGCTGCTGATCCGGTGGG-ATACCCTCTTTGTCTTGAATCTT 731467 Query 39201 CTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 || | || | | || ||| || | ||| || || | |||||| | || || || Sbjct 731468 GGCCTTCACATTCTCAATCGAATCACTAGGCTCAACCTCGAGGGTGATAGTCTTCCCGGT 731527 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || |||||||||||||| Sbjct 731528 AAGCGTCTTCACAAAGATTTGCAT 731551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429526617574538