Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20saginata_20[genbank_20GCA_5F001693075.2_202016-10-23] 3,626 sequences; 169,104,283 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq32 131 1e-25 >seq32 Length=1043406 Score = 131 bits (144), Expect = 1e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||| |||||||| || ||||| || |||||||| || Sbjct 739020 CATACCACCACGCAGACGAAGCACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTC 738961 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || || | || |||| |||||| || || |||||||||||||||||||| | Sbjct 738960 TGATAGGGTACGACCATCCTCCAACTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGG 738901 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||| ||||| ||| ||||| ||||| | | || |||||| | ||| Sbjct 738900 CGGAATACCCTCCTTATCCTGAATCTTGGCCTTCACATTCTCAATTGTGTCGCTAGGTTC 738841 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| |||| |||||| ||||| || || || ||||||||||| ||||||||| Sbjct 738840 CACTTCCAGCGTAATAGTCTTCCCAGTCAGCGTCTTCACGAATATTTGCATG 738789 Score = 125 bits (138), Expect = 5e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| |||||||| ||| |||||||||||||||||| || | || ||| | || || Sbjct 749223 CACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGATAGGGTGCGGCCATCTTC 749164 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| || || |||||||| || ||||| |||| ||| | || ||||| ||| Sbjct 749163 CAACTGCTTGCCAGCGAAGATCAATCGTTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTG 749104 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||||| |||| | || | ||| || |||||||||| || || || | Sbjct 749103 GATCTTTGCCTTCAC-GTTCTCAATCGAGTCACTGGGCTCCACCTCCAGTGTGATTGTTT 749045 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || || |||||||||||||| ||||| Sbjct 749044 TGCCGGTTAGAGTCTTCACGAAGATCTGCAT 749014 Score = 123 bits (136), Expect = 2e-23 Identities = 156/212 (74%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||||||||| ||| || ||||||||||| |||| | ||| | || || Sbjct 731114 CACCAAGTGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGACAACGTGCGACCATCCTC 731173 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| || ||||||||||| || ||||| || | || | || ||||| ||| Sbjct 731174 CAACTGCTTTCCTGCAAAGATCAATCGTTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTG 731233 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| |||| | |||| |||| | ||| | |||||||||| |||||| |||| Sbjct 731234 GATCTTCGCCTTC-ACGTTCTCTATCGAGTCACTTGGCTCCACCTCCAACGTAATTGTCT 731292 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || || || |||||||| || || |||||| Sbjct 731293 TCCCAGTCAGCGTCTTCACAAATATCTGCATG 731324 Score = 123 bits (136), Expect = 2e-23 Identities = 156/212 (74%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||||||||| ||| || ||||||||||| |||| | ||| | || || Sbjct 739455 CACCAAGTGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGACAACGTGCGACCATCCTC 739396 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| || ||||||||||| || ||||| || | || | || ||||| ||| Sbjct 739395 CAACTGCTTTCCTGCAAAGATCAATCGTTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTG 739336 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| |||| | |||| |||| | ||| | |||||||||| |||||| |||| Sbjct 739335 GATCTTCGCCTTC-ACGTTCTCTATCGAGTCACTTGGCTCCACCTCCAACGTAATTGTCT 739277 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || || || |||||||| || || |||||| Sbjct 739276 TCCCAGTCAGCGTCTTCACAAATATCTGCATG 739245 Score = 120 bits (132), Expect = 2e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | |||| | ||| ||||| || || ||||||||| ||||| || || Sbjct 737880 CATCCCACCACGAAGTCGGAGCACAAGGTGGAGGGTTGACTCCTTTTGAATGTTATAGTC 737821 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || |||| ||||||||| |||||||| | ||| ||||| || | Sbjct 737820 AGACAGGGTGCGACCATCTTCCAACTGCTTCCCCGCAAAGATTAGACGTTGCTGGTCCGG 737761 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || ||||| || |||||| ||||| | | || |||||| || ||| Sbjct 737760 TGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCAATTGTGTCGCTGGGTTC 737701 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| |||||| ||||| || || || || ||||| || |||||||| Sbjct 737700 CACCTCCAGCGTAATTGTCTTGCCGGTTAGAGTTTTCACAAAAATTTGCAT 737650 Score = 120 bits (132), Expect = 2e-22 Identities = 169/235 (72%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || | || | | ||| || ||||| ||| ||||||||||||||||| Sbjct 748791 TTGCATTCCACCACGAAGACGGAGCACAAGATGAAGAGTGGATTCCTTTTGGATGTTGTA 748732 Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | | || || || | || |||| |||||| || |||||||||| || ||||||| Sbjct 748731 GTCAGACAAGGTG-CGACCATCTTCCAACTGCTTTCCCGCAAAGATCAGGCGTTGCTGAT 748673 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 ||| || | || ||||| ||| ||||| ||||| | |||| | ||| || Sbjct 748672 CTGGTGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTCACATTCTCTATCGAGTCACTGG 748613 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||| || || || || || || | |||||||||||||||||||| Sbjct 748612 GCTCCACCTCCAGTGTGATTGTTTTGCCAGTCAAAGTCTTCACGAAGATTTGCAT 748558 Score = 118 bits (130), Expect = 8e-22 Identities = 167/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||| ||||||||||| ||||||||| |||||||| || Sbjct 731321 CATGCCACCACGCAGACGAAGCACTAGGTGAAGCGTTGACTCCTTTTGAATGTTGTAGTC 731380 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || || |||| |||| ||| || || ||||||||||||||||||||||| | Sbjct 731381 GGAAAGAGTCCGACCGTCCTCCAACTGTTTGCCAGCAAAGATCAAACGCTGCTGATCCGG 731440 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||| || || || ||||| ||||| | | || | || | || Sbjct 731441 TGGGATACCCTCTTTGTCTTGAATCTTGGCCTTCACATTCTCAATCGAATCACTAGGCTC 731500 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||||| | || || ||||| || || || |||||||| ||||||||||||||| Sbjct 731501 AACCTCGAGGGTGATAGTCTTCCCGGTAAGCGTCTTCACAAAGATTTGCATGATG 731555 Score = 116 bits (128), Expect = 3e-21 Identities = 167/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | |||| | ||| || |||||||| ||||||||| |||||||| || Sbjct 738336 CATGCCACCACGAAGTCGTAGCACAAGATGAAGCGTTGACTCCTTTTGAATGTTGTAGTC 738277 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| | || |||| ||||| || |||||||||||||||||||| |||| Sbjct 738276 GGAAAGAGTGCGGCCATCTTCCAATTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGG 738217 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| || |||||| || | | |||| | || | || || || Sbjct 738216 TGGAATGCCTTCCTTATCTTGGATCTTC-GCCTTTACGTTCTCAATCGAATCACTGGGTT 738158 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || || | ||| || ||||| || || || ||||| || ||||| |||||| Sbjct 738157 CAACTTCTAGCGTTATGGTCTTGCCGGTTAGAGTCTTGACAAAGATCTGCATG 738105 Score = 111 bits (122), Expect = 1e-19 Identities = 166/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | |||| | ||| || |||||||| ||||||||| ||||||||||| Sbjct 738564 CATACCACCACGGAGTCGAAGCACGAGATGAAGCGTTGACTCCTTTTGAATGTTGTAATC 738505 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| |||| |||| |||||| || || || ||||||||||| ||||||| Sbjct 738504 AGAAAGAGTGCGACCGTCTTCCAACTGCTTACCAGCGAAAATCAAACGCTGTTGATCTGG 738445 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| || |||||| || | | |||| | || | || || || Sbjct 738444 CGGAATGCCCTCCTTATCTTGGATCTTC-GCCTTTACGTTCTCAATCGAATCACTGGGTT 738386 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || || | ||| || ||||| || || || ||||| || ||||| |||||| Sbjct 738385 CAACTTCTAGCGTTATGGTCTTGCCGGTTAGAGTCTTGACAAAGATCTGCATG 738333 Score = 109 bits (120), Expect = 4e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | |||| | ||| || |||||||| ||||||||| |||||||| || Sbjct 738108 CATGCCACCACGAAGTCGTAGCACAAGATGAAGCGTTGACTCCTTTTGAATGTTGTAGTC 738049 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| | || |||| ||||| || |||||||||||||||||||| |||| Sbjct 738048 GGAAAGAGTGCGGCCATCTTCCAATTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGG 737989 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| || |||||| || | | |||| | || | ||| || || Sbjct 737988 TGGAATGCCCTCCTTATCTTGGATCTTC-GCCTTTACGTTCTCAATCGAATCGCTGGGTT 737930 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || | ||| || ||||| || || || ||||| || || || ||||| Sbjct 737929 CAACTTCTAGCGTTATGGTCTTGCCGGTTAGAGTCTTGACAAAAATCTGCAT 737878 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||| ||||||||||| ||||||||| |||||||| || Sbjct 739248 CATGCCACCACGCAGACGAAGCACTAGGTGAAGCGTTGACTCCTTTTGAATGTTGTAGTC 739189 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || || |||| |||| ||| || || ||||||||||||||||||||||| | Sbjct 739188 GGAAAGAGTCCGACCGTCCTCCAACTGTTTGCCAGCAAAGATCAAACGCTGCTGATCCGG 739129 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||| || || || ||||| ||||| | | || | || | || Sbjct 739128 TGGGATACCCTCTTTGTCTTGAATCTTGGCCTTCACATTCTCAATCGAATCACTAGGCTC 739069 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || || ||||| || || || ||||| |||||||| ||||| Sbjct 739068 AACCTCGAGGGTGATAGTCTTCCCGGTAAGAGTCTTTACGAAGATCTGCAT 739018 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| |||||||| || ||||| ||||||||||| |||| | | ||| | || || Sbjct 730886 CACAAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAATGTGCGACCATCTTC 730945 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| || || |||||||| || || || |||| || | || ||||| ||| Sbjct 730946 CAACTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCCTG 731005 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | | |||| | || | || | || ||||| | || || |||| Sbjct 731006 GATCTT-TGCCTTCACGTTCTCAATCGAATCACTAGGCTCAACCTCGAGGGTGATAGTCT 731064 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || || ||||| |||||||| ||||| Sbjct 731065 TCCCGGTAAGAGTCTTTACGAAGATCTGCAT 731095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359974491349242