Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq1039 86.0 5e-12
>seq1039
Length=57342
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
||||||||||||||||||||| | || ||||| || || ||| | || || || | ||
Sbjct 42642 ATGCAGATATTTGTTAAAACCCTCACTGGCAAGACCATCACCTTGGAGGTGGAGCCAAGT 42583
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
||| |||| | || |||| || || | || || ||| | || ||||||
Sbjct 42582 GACTCGATAGAGAACGTGAAGGCGAAGATCCAAGATAAGGAGGGCATTCCACCAGACCAG 42523
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
||||| || || | || || || || ||||| ||| || || ||||||| |
Sbjct 42522 CAACGATTGATTTTCGCAGGAAAGCAGCTGGAGGATGGTCGCACCTTGTCTGATTACAAC 42463
Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058
|| ||||| ||| | |||||||| || ||| | || ||||| || ||
Sbjct 42462 ATTCAGAAGGAGTCGACGCTTCACTTGGTGCTGCGTTTGCGTGGTGG 42416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418237057111520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |