Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq11759 100 6e-16 >seq11759 Length=791511 Score = 100 bits (110), Expect = 6e-16 Identities = 202/299 (68%), Gaps = 3/299 (1%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || || || ||||| |||||||| | |||||| |||| |||| || |||||||||||| Sbjct 466218 GTGGCGTTCGCTGCCGTTGAAGGCGTATTCTTTTCTGGTTCATTTGCTTCCATTTTCTGG 466159 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | ||| | ||||||| ||||||| |||||| | || | | ||| Sbjct 466158 CTCAAGAAGCGTGGTCTCATGCCTGGCCTCACCTTTAGTAATGAGCTGATCAGTCGAGAC 466099 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 ||||| || || || ||||||||| | | || ||| | | || | | | || Sbjct 466098 GAAGGCCTCCACACGGATTTTGCATGCCTTATTTTTAAACA---TATTATCAACAAGCCT 466042 Query 102098 TCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTC 102157 | |||||| || ||| || | | || || ||| | |||||| |||||||| Sbjct 466041 ACGGCGGAAAGGGTTTATGACATCATGAGGGAGGCGGTCAGTATTGAATGCGAATTTCTT 465982 Query 102158 ACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACAT 102216 |||| ||||||||||| | | | || ||||| || || ||| | ||||| || Sbjct 465981 ACAGACGCCCTGCCTGTTGATCTTATTGGCATGAATTGTCGCTTAATGTGTCAGTATAT 465923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989417511460105