Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq11759 100 6e-16
>seq11759
Length=791511
Score = 100 bits (110), Expect = 6e-16
Identities = 202/299 (68%), Gaps = 3/299 (1%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| || || ||||| |||||||| | |||||| |||| |||| || ||||||||||||
Sbjct 466218 GTGGCGTTCGCTGCCGTTGAAGGCGTATTCTTTTCTGGTTCATTTGCTTCCATTTTCTGG 466159
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||||||| | ||| | ||||||| ||||||| |||||| | || | | |||
Sbjct 466158 CTCAAGAAGCGTGGTCTCATGCCTGGCCTCACCTTTAGTAATGAGCTGATCAGTCGAGAC 466099
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
||||| || || || ||||||||| | | || ||| | | || | | | ||
Sbjct 466098 GAAGGCCTCCACACGGATTTTGCATGCCTTATTTTTAAACA---TATTATCAACAAGCCT 466042
Query 102098 TCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTC 102157
| |||||| || ||| || | | || || ||| | |||||| ||||||||
Sbjct 466041 ACGGCGGAAAGGGTTTATGACATCATGAGGGAGGCGGTCAGTATTGAATGCGAATTTCTT 465982
Query 102158 ACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACAT 102216
|||| ||||||||||| | | | || ||||| || || ||| | ||||| ||
Sbjct 465981 ACAGACGCCCTGCCTGTTGATCTTATTGGCATGAATTGTCGCTTAATGTGTCAGTATAT 465923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989417511460105
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |