Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq11759 98.7 7e-16 >seq11759 Length=791511 Score = 98.7 bits (108), Expect = 7e-16 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 ||||| |||| || || || ||||||||||| | |||||||| |||||||| |||| Sbjct 466224 CGTCTGGTGGCGTTCGCTGCCGTTGAAGGCGTATTCTTTTCTGGTTCATTTGCTTCCATT 466165 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||||| ||||| ||| |||||||| || | | ||| || ||| |||| || Sbjct 466164 TTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCCTCACCTTTAGTAATGAGCTGATCAGT 466105 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTG 22892 || |||||||| || ||| || ||||| || Sbjct 466104 CGAGACGAAGGCCTCCACACGGATTTTGCATG 466073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356176590489793