Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq11759 154 1e-32
>seq11759
Length=791511
Score = 154 bits (170), Expect = 1e-32
Identities = 402/607 (66%), Gaps = 6/607 (1%)
Strand=Plus/Plus
Query 13644 ATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTC 13703
|||||||||||| | || |||||||| || ||||| || |||| ||| || || ||
Sbjct 466057 ATGTTTAAAAATAAGGCATGCAAAATCCGTGTGGAGGCCTTCGTCTCGACTGATCAGCTC 466116
Query 13704 GTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAA 13763
|| ||| || | || ||||| | || || || || | ||| || || | ||| ||
Sbjct 466117 ATTACTAAAGGTGAGGCCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAA 466176
Query 13764 TGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGA 13823
||| || |||||||||| || ||||| ||||| ||||| | || || || | | |
Sbjct 466177 TGAACCAGAAAAGAATACGCCTTCAACGGCAGCGAACGCCACCAGACGCTCGGCGTAGGG 466236
Query 13824 TGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCAT 13883
||| ||||| |||| ||||| | ||||| || | || || || | | ||
Sbjct 466237 TGCCTTTTTATTTGCAATCCACCTAAGCGCCCAATCGGCCTTCTTAGCAACACACGGCAA 466296
Query 13884 TGTTTCGATTGCATTGAATA-AATGT-TCCTTCTCTTTAGTACTTGAAATGTATGTATCA 13941
|||| || || || || | || || | ||| || | |||| | ||| |||||
Sbjct 466297 CGTTTGAATGGCGTTAAACAGAAAGTCGCGTTCCATTGGATCCTTG--ACGTAGGTATCG 466354
Query 13942 ATAAGTAAGCTA-TACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAA 14000
|| || ||| | ||||||||||| || |||||||| | || | || | ||||||||
Sbjct 466355 ATCAG-AAGAGAGTACATTTCAGAATGAATGTTTTCGACGGCGACTTGCATTCCATAAAA 466413
Query 14001 ACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAAC 14060
||| | ||| || | ||| ||||| |||| | | | |||||||||||
Sbjct 466414 ACAACGAGCCTCGGGAATTTGAACCTCGTTACAAAAATTCAAAGTTAGATTTTCATTAAC 466473
Query 14061 AATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT 14120
|| |||||||| ||||| || || ||||| | | ||| |||| | || |||
Sbjct 466474 GATGCCATCACTGGCTGCGAAGAAAGCCAAGACATACGAAATGAAGTGACGTTCGCCATC 466533
Query 14121 GTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14180
|| || ||| ||| || | | |||||| | ||||| ||||| ||||| ||||| ||
Sbjct 466534 ATTAAGGCTTTCCCAGTCAGTGAGATCCTTCGCTAGATCAACTTCCTCAACCGTCCAGAA 466593
Query 14181 ACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTAC 14240
| || || ||||| || || | |||| || || | ||| || || | || ||
Sbjct 466594 AGAGGCAACCGCTTTCTTGTAGAACTCCCAAATATCATGGTATTGGATGGGCATCACAAC 466653
Query 14241 AAATCTT 14247
||||||
Sbjct 466654 GAATCTT 466660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478510245630840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |