Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq11759 154 1e-32
>seq11759
Length=791511
Score = 154 bits (170), Expect = 1e-32
Identities = 407/615 (66%), Gaps = 5/615 (1%)
Strand=Plus/Plus
Query 13128 TTGATAG-ATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTT 13186
|||||| ||| ||||| || | ||||||||||| ||| | ||||| |||| |||
Sbjct 466049 TTGATAATATGTTTAAAAATAAGGCATGCAAAATCCGTGTGGAGGCCTTCGTCTCGACTG 466108
Query 13187 ATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATA 13246
|| ||||| || ||| || || || ||||| || || || || || | ||| || ||
Sbjct 466109 ATCAGCTCATTACTAAAGGTGAGGCCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATG 466168
Query 13247 GCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCA 13306
| |||||| ||||| ||||| |||| |||||||| || || ||||| | || | ||
Sbjct 466169 GAAGCAAATGAACCAGAAAAGAATACGCCTTCAACGGCAGCGAACGCCACCAGACGCTCG 466228
Query 13307 CCATACGTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACG 13366
| || | |||||| | | |||||| | ||||| | || || | |||
Sbjct 466229 GCGTAGGGTGCCTTTTTATTTGCAATCCACCTAAGCGCCCAATCGGCCTTCTTAGCAACA 466288
Query 13367 CAGTTCATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAA 13426
|| || ||| || |||||||| | | | | |||| | || | ||
Sbjct 466289 CACGGCAACGTTTGAATGGCGTTAAACAGAAAGTCGCGTTCCATTGGATCCTTGACGTAG 466348
Query 13427 GTATCTATCAATAAGCTA-TACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACC 13485
||||| ||| | ||| | |||||||| |||||||| ||||| | || | ||| | ||
Sbjct 466349 GTATCGATC-AGAAGAGAGTACATTTCAGAATGAATGTTTTCGACGGCGACTTGCATTCC 466407
Query 13486 ATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTC 13545
||||||||| | |||||| | | ||||| ||| |||| | | || |||||
Sbjct 466408 ATAAAAACAACGAGCCTCGGGAATTTGAACCTCGTTACAAAAATTCAAAGTTAGATTTTC 466467
Query 13546 GTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttC 13605
||||| || || ||||| || || || ||||| | | | | ||| || | |||
Sbjct 466468 ATTAACGATGCCATCACTGGCTGCGAAGAAAGCCAAGACATACGAAATGAAGTGACGTTC 466527
Query 13606 GTTTTC-TGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGG 13664
| || | | |||| ||| || | | ||| || | || ||| || |||||||| |
Sbjct 466528 GCCATCATTAAGGCTTT-CCCAGTCAGTGAGATCCTTCGCTAGATCAACTTCCTCAACCG 466586
Query 13665 TCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAA 13724
|||| ||||| ||||| || ||||| || | | ||| ||||| | || ||||| |
Sbjct 466587 TCCAGAAAGAGGCAACCGCTTTCTTGTAGAACTCCCAAATATCATGGTATTGGATGGGCA 466646
Query 13725 ACACAACGTATCTTC 13739
||||||| ||||||
Sbjct 466647 TCACAACGAATCTTC 466661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430913428135662
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |