Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq11759 86.0 7e-12 >seq11759 Length=791511 Score = 86.0 bits (94), Expect = 7e-12 Identities = 120/167 (72%), Gaps = 1/167 (1%) Strand=Plus/Plus Query 21456 ATAAT-TGTTTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATT 21514 ||||| |||||||| || | ||||||||||| || | ||||| || | ||| || Sbjct 466052 ATAATATGTTTAAAAATAAGGCATGCAAAATCCGTGTGGAGGCCTTCGTCTCGACTGATC 466111 Query 21515 AATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGAC 21574 | |||||| ||| || | || ||||| | || | ||| || | ||| || || || Sbjct 466112 AGCTCATTACTAAAGGTGAGGCCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAA 466171 Query 21575 GCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAAC 21621 ||||||| || |||||||| | ||| ||||||||||| || || || Sbjct 466172 GCAAATGAACCAGAAAAGAATACGCCTTCAACGGCAGCGAACGCCAC 466218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531813495132440