Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq11759 86.0 7e-12
>seq11759
Length=791511
Score = 86.0 bits (94), Expect = 7e-12
Identities = 120/167 (72%), Gaps = 1/167 (1%)
Strand=Plus/Plus
Query 21456 ATAAT-TGTTTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATT 21514
||||| |||||||| || | ||||||||||| || | ||||| || | ||| ||
Sbjct 466052 ATAATATGTTTAAAAATAAGGCATGCAAAATCCGTGTGGAGGCCTTCGTCTCGACTGATC 466111
Query 21515 AATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGAC 21574
| |||||| ||| || | || ||||| | || | ||| || | ||| || || ||
Sbjct 466112 AGCTCATTACTAAAGGTGAGGCCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAA 466171
Query 21575 GCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAAC 21621
||||||| || |||||||| | ||| ||||||||||| || || ||
Sbjct 466172 GCAAATGAACCAGAAAAGAATACGCCTTCAACGGCAGCGAACGCCAC 466218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531813495132440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |