Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq11759 214 2e-50
>seq11759
Length=791511
Score = 214 bits (236), Expect = 2e-50
Identities = 391/573 (68%), Gaps = 0/573 (0%)
Strand=Plus/Plus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| ||||| || || || | ||||||||||| |||| |||||| || || || |
Sbjct 466072 GCATGCAAAATCCGTGTGGAGGCCTTCGTCTCGACTGATCAGCTCATTACTAAAGGTGAG 466131
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
|| || | || || || ||||||||||| || || |||||||| ||||||||| ||
Sbjct 466132 GCCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAATGAACCAGAAAAGAA 466191
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270
|| ||||| ||||| || || ||||| | ||| ||||| | ||| ||| |
Sbjct 466192 TACGCCTTCAACGGCAGCGAACGCCACCAGACGCTCGGCGTAGGGTGCCTTTTTATTTGC 466251
Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330
||||| | | ||||||||||| || || || ||| || | |||| || |||||
Sbjct 466252 AATCCACCTAAGCGCCCAATCGGCCTTCTTAGCAACACACGGCAACGTTTGAATGGCGTT 466311
Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390
||| || | || || || | ||| | ||| |||||||| | ||||| |||||
Sbjct 466312 AAACAGAAAGTCGCGTTCCATTGGATCCTTGACGTAGGTATCGATCAGAAGAGAGTACAT 466371
Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450
||||||||| | || || | || | ||| | ||| || ||||| | ||| || | ||
Sbjct 466372 TTCAGAATGAATGTTTTCGACGGCGACTTGCATTCCATAAAAACAACGAGCCTCGGGAAT 466431
Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510
|| || || | | |||| || ||||||||||| || || ||||| |||||
Sbjct 466432 TTGAACCTCGTTACAAAAATTCAAAGTTAGATTTTCATTAACGATGCCATCACTGGCTGC 466491
Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATC 93570
|| |||||||| | || | || || || || |||| ||||| | ||||| ||
Sbjct 466492 GAAGAAAGCCAAGACATACGAAATGAAGTGACGTTCGCCATCATTAAGGCTTTCCCAGTC 466551
Query 93571 GGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTT 93630
| ||||| || | ||||| ||||| || || ||||| || || || | ||||| ||
Sbjct 466552 AGTGAGATCCTTCGCTAGATCAACTTCCTCAACCGTCCAGAAAGAGGCAACCGCTTTCTT 466611
Query 93631 GTACATATCCCATATGTCTTGATATTGAATTGG 93663
||| | ||||| || || || ||||| || ||
Sbjct 466612 GTAGAACTCCCAAATATCATGGTATTGGATGGG 466644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556769398260440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |