Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq11759 100 3e-16 >seq11759 Length=791511 Score = 100 bits (110), Expect = 3e-16 Identities = 338/519 (65%), Gaps = 8/519 (2%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || |||||| || ||||| || ||| || ||||| ||| || || Sbjct 466076 GCAAAATCCGTGTGGAGGCCTTCGTCTCGACTGATCAGCTCATTACTAAAGGTGAGGCCA 466135 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||||||||| |||||||| | ||||||||| | | ||||||||| || ||||| | Sbjct 466136 GGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAATGAACCAGAAAAGAATACG 466195 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGT-CAAA 126225 || || || |||||||| | |||||||| || ||| | || ||| | | ||| Sbjct 466196 CCTTCAACGGCAGCGAACGCCACCAGACGCTCGGCGTAGG-GTGCCTTTTTATTTGCAAT 466254 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285 |||| | | |||||| | ||||| || | | |||||| | || || || || | ||| Sbjct 466255 CCACCTAAGCGCCCAATCGGCCTTCTTAGCAACACACGGCAACGTTTGAATGGCGTTAAA 466314 Query 126286 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 126345 || | ||| |||||| |||| ||| |||| || || || || |||| Sbjct 466315 CAGAAAGTCGCGTTCCATTGGATCCTTGACGTAGGTATCGATCAGAAGAGAGTACATTTC 466374 Query 126346 GCCGTGGACCATTTCATTATGGC-ACT--GATACGCGTAGAAAGAGCGCGCTTCGCTTAT 126402 || | |||| | ||| ||| || | | || ||| | || || ||| || Sbjct 466375 AGAATGAATGTTTTC--GACGGCGACTTGCATTC-CATAAAAACAACGAGCCTCGGGAAT 466431 Query 126403 CTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 126462 || ||||| | |||||| | | | ||| ||| ||| || ||||| | || Sbjct 466432 TTGAACCTCGTTACAAAAATTCAAAGTTAGATTTTCATTAACGATGCCATCACTGGCTGC 466491 Query 126463 AAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAGTC 126522 || || |||| || |||| ||||| | |||| || || ||| | | |||||| Sbjct 466492 GAAGAAAGCCAAGACATACGAAATGAAGTGACGTTCGCCATCATTAAGGCTTTCCCAGTC 466551 Query 126523 GTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||||||||| ||||| || ||||| | ||||| Sbjct 466552 AGTGAGATCCTTCGCTAGATCAACTTCCTCAACCGTCCA 466590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597255551873480