Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq11759 104 3e-17
>seq11759
Length=791511
Score = 104 bits (114), Expect = 3e-17
Identities = 339/521 (65%), Gaps = 12/521 (2%)
Strand=Plus/Plus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || |||||| || ||||| || ||| || ||||| ||| || ||
Sbjct 466076 GCAAAATCCGTGTGGAGGCCTTCGTCTCGACTGATCAGCTCATTACTAAAGGTGAGGCCA 466135
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
||||||||||| |||||||| | ||||||||| | | |||||| ||||| ||||| |
Sbjct 466136 GGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAATGAACCAGAAAAGAATACG 466195
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTAT---CA 127696
|| || || |||||||| | ||||||||||| | || | | |||| ||| ||
Sbjct 466196 CCTTCAACGGCAGCGAACGCCACCAGACGCTCGGC---GTAGGGTGCCTTTTTATTTGCA 466252
Query 127697 AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCA 127756
| |||| | | |||||| | ||||| || | | ||| || | || || || || | |
Sbjct 466253 ATCCACCTAAGCGCCCAATCGGCCTTCTTAGCAACACACGGCAACGTTTGAATGGCGTTA 466312
Query 127757 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 127816
|| || | ||| |||||| |||| ||| |||| || || || || ||
Sbjct 466313 AACAGAAAGTCGCGTTCCATTGGATCCTTGACGTAGGTATCGATCAGAAGAGAGTACATT 466372
Query 127817 TCGCCGTGGACCATTTCATTATGGC-ACT--GATACGCGTAGAAAGAGCGCGCTTCGCTT 127873
|| || | |||| | ||| ||| || | | || ||| | || || |||
Sbjct 466373 TCAGAATGAATGTTTTC--GACGGCGACTTGCATTC-CATAAAAACAACGAGCCTCGGGA 466429
Query 127874 ATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 127933
|| || ||||| | |||||| | | | ||| ||| ||| || ||||| |
Sbjct 466430 ATTTGAACCTCGTTACAAAAATTCAAAGTTAGATTTTCATTAACGATGCCATCACTGGCT 466489
Query 127934 GCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAG 127993
|| || || |||| || |||| ||||| | |||| || || ||| | | ||||
Sbjct 466490 GCGAAGAAAGCCAAGACATACGAAATGAAGTGACGTTCGCCATCATTAAGGCTTTCCCAG 466549
Query 127994 TCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
|| ||||||||| | ||||| || ||||| | |||||
Sbjct 466550 TCAGTGAGATCCTTCGCTAGATCAACTTCCTCAACCGTCCA 466590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613406500461960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |