Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq11759 104 4e-17
>seq11759
Length=791511
Score = 104 bits (114), Expect = 4e-17
Identities = 226/336 (67%), Gaps = 2/336 (1%)
Strand=Plus/Plus
Query 159911 TTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTG 159970
||||| | ||||| ||||| || ||| || || ||||| ||| ||| | ||| ||
Sbjct 466061 TTAAAAATAAGGCATGCAAAATCCGTGTGGAGGCCTTCGTCTCGACTGATCAGCTCATTA 466120
Query 159971 GACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCA 160030
| | ||||||| ||||||| |||||| |||||||| ||||||| ||||| | |
Sbjct 466121 CTAAAGGTGAGGCCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAATGAA 466180
Query 160031 CCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCG 160090
|| ||| || | || || ||||| || |||||||| || | ||| | | | ||
Sbjct 466181 CCAGAAAAGAATACGCCTTCAACGGCAGCGAACGCCACCAGACGCTCGGCGTAGGGTGCC 466240
Query 160091 TTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGC 160150
|| | | ||||||| ||||| || |||||||| || | ||||||| ||
Sbjct 466241 TTTTTATTTGCAATCCACCTAAGCGCCCAATCGGCCTTCTTAGCAACACACGGCAA-CGT 466299
Query 160151 TCGAC-GGCGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAG 160209
| || ||||||||||| ||| | ||| | |||||||| ||| | |||||
Sbjct 466300 TTGAATGGCGTTAAACAGAAAGTCGCGTTCCATTGGATCCTTGACGTAGGTATCGATCAG 466359
Query 160210 CTTCGAGTACATTTCTGCGTGCACATTTTCGATGGC 160245
||||||||||| | || | ||||||| |||
Sbjct 466360 AAGAGAGTACATTTCAGAATGAATGTTTTCGACGGC 466395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795024685213360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |