Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq6307 223 3e-52 seq8799 181 8e-40 seq12962 178 1e-38 seq5041 132 4e-25 seq9595 125 5e-23 seq5573 113 3e-19 seq7919 104 2e-16 seq6391 104 2e-16 seq24 102 6e-16 >seq6307 Length=230001 Score = 223 bits (246), Expect = 3e-52 Identities = 414/605 (68%), Gaps = 2/605 (0%) Strand=Plus/Minus Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167 ||||| ||| ||||| |||| ||||||||| || ||||| | | |||| || Sbjct 29864 ACATCGAAGGTGCCACCGCCCAAATCAAAAATGAGCACATTGCTCTGCCTGTCAACCTTC 29805 Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || || | | || |||| |||||||| ||||| ||||||||||| | || ||||| Sbjct 29804 TTGTCCAAGCTGTAGGCAATGGCAGCAGCCGTTGGCTCATTAATAATGCGTAATACATTC 29745 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | |||||| ||| ||||||| || | || ||||| | || ||| || ||||| || Sbjct 29744 AAACCAGCGATTTTTCCTGCGTCCATCGTCGCTTGACACTGGCTATCATTGAAATACGCT 29685 Query 518288 GGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTC 518347 || || || || || || | || ||||| || || | |||||| ||||||| ||| Sbjct 29684 GGTACCGTGATCACCGCGTTTGTCACTTCCTTGCCCAAATAAGCTTCCGCCGTTTCCTTC 29625 Query 518348 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATTTTGA 518407 ||||| | | | ||| | || || | || || | ||||| | ||| | Sbjct 29624 ATTTTCATAAGCACCATAGCCGAGATCTCCTCCGGAACGAACTGCTT-TACTCACCGCGG 29566 Query 518408 TATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTC 518467 || ||| || || |||||||| | ||| ||| | |||||||| |||||||| ||| Sbjct 29565 TACTCTACCTC-AATTATGGTTTCCTTCCAGAATTTACCACTTTAAACGGCCAGTACTTC 29507 Query 518468 ATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAA 518527 ||||| ||| || | | |||||| |||| | ||||| | || || | |||||| Sbjct 29506 ATATCACCTTGCACTGTCTTGTCATTGAAATAACGTCCAATCAGACGCTTCACGTCAAAA 29447 Query 518528 ATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCT 518587 | || || || || || | || || |||| || || | ||| || || ||| ||||| Sbjct 29446 ACCGTGTTAGTCGGGTTCAGAGCTGCCTGATTCTTTGCAGAATCACCGATAAGAGGTTCT 29387 Query 518588 GTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATT 518647 | || || || | ||||| || ||||| |||| ||||||||| || ||||| ||| Sbjct 29386 TTTTCCGTGAAGGCCACATAACTGGGCGTTGTTCGATAACCTTGATCGTTGGCAATTATT 29327 Query 518648 TCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCA 518707 || || || || | ||| | ||||| ||||| |||||||| ||||| || || ||| Sbjct 29326 TCTACCTTGCCGTCTTGAAAGACACCAACACACGAGAAAGTTGTGCCTAAGTCGATGCCA 29267 Query 518708 ATAGC 518712 || || Sbjct 29266 ATGGC 29262 >seq8799 Length=129867 Score = 181 bits (200), Expect = 8e-40 Identities = 403/605 (67%), Gaps = 0/605 (0%) Strand=Plus/Minus Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167 ||||| ||| || || |||| || ||||| || || || || ||| || || Sbjct 11431 ACATCGAAGGTACCCCCGCCCAAGTCGAAAATGAGCACGTTGCGCTCCTTGCCTACCTTC 11372 Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 ||||| | || || || | || || || || || ||||||||||| | ||| ||||| Sbjct 11371 TTATCCAAGCCGTAGGCGATGGCGGCTGCTGTCGGCTCATTAATAATACGCAATACATTC 11312 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | || | || | |||||||| || || || || | || ||||| || || || Sbjct 11311 ATGCCTGATATCGTGCCTGCATCCTTCGTTGCCTGACGCTGACTGTCGTTGAAGTAAGCC 11252 Query 518288 GGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTC 518347 || || || || || ||||||||||| | ||| || | || || ||| |||| ||| Sbjct 11251 GGCACCGTGATGACCGCATCAGTTACCTTTTTGCCCAAGTACGCCTCTGCAGTTTCCTTC 11192 Query 518348 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATTTTGA 518407 ||||| || | ||| || || |||| || | | ||||||||| ||| || Sbjct 11191 ATTTTTAGTAGTACCATGGACGAGATTTCCTCCGCGCTGAATTGCTTGGTCTCACCACGA 11132 Query 518408 TATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTC 518467 || |||||||| | || || || ||| || |||||||| ||||| | ||| Sbjct 11131 TACTCTACTTCAATCTTCGGCTTGCCTCCCGAATTGATCACTTTAAAGGGCCAATGCTTC 11072 Query 518468 ATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAA 518527 || || ||| || | | ||| | |||| | ||||| || ||||| ||||| || Sbjct 11071 ATGTCACTTTGCACCGTCTTGTCTTCAAAACGACGTCCAATCAAGCGTTTGGCATCGAAC 11012 Query 518528 ATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCT 518587 | || ||| | ||||| || || | |||| || || ||||| ||||| ||| | ||| Sbjct 11011 ACCGTGTTGCTAGGATTCATGGCTACCTGATTCTTAGCAGCATCACCAATGAGACGCTCT 10952 Query 518588 GTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATT 518647 || || ||||| | ||||| || || || ||||| || || ||||| || || || Sbjct 10951 GTATCCGTAAAGGCGACATAACTCGGTGTAGTACGATTGCCCTGGTCATTGGCGATTATC 10892 Query 518648 TCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCA 518707 || || || |||| ||| | || || || || ||||| || || ||||| ||||| Sbjct 10891 TCCACCTTGCCATGTTGAAACACGCCAACGCAGGAGAAAGTCGTCCCCAAATCGATACCG 10832 Query 518708 ATAGC 518712 | ||| Sbjct 10831 ACAGC 10827 >seq12962 Length=275956 Score = 178 bits (196), Expect = 1e-38 Identities = 447/670 (67%), Gaps = 16/670 (2%) Strand=Plus/Plus Query 518017 AAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTG 518076 |||||| | |||||| |||||||| || | | ||| | || || || |||| Sbjct 129687 AAGACGCTGATCAAAGTCTTCACCACCAAGATGAGTGTCACCACTGGTCGCAACAACTTC 129746 Query 518077 GAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAA 518136 || | |||| || | | || || | ||||| ||| |||||||||| |||||| Sbjct 129747 AAACACACCATTGTCGATTGTCAGGAGGGAGACATCGAAGGTGCCACCACCCAGATCAAA 129806 Query 518137 AATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGC 518196 | || | |||| |||| |||||| |||| || | ||||| || | ||||| || Sbjct 129807 CACGAGGATATTCTTTTCAGTGTCTT---TTTTGTCCAACCCATAGGCGATCGCAGCTGC 129863 Query 518197 AGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGT 518256 ||||||||||| ||||| | ||| || | ||||||||||| || ||||||||||| Sbjct 129864 GGTTGGTTCATTGATAATCCGCAACACGGTCAGACCAGCAATGGCACCAGCATCTTTAGT 129923 Query 518257 GGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTC 518316 ||||| | ||| | || || || || ||||| ||||| | ||| |||| || ||| | Sbjct 129924 TGCTTGACGTTGGGCGTCATTGAAGTAGGCAGGCACAGTGACAACAGCATGCGTAACTGC 129983 Query 518317 TTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTG 518376 | |||| ||| || || ||| ||||||||||| | || ||| | |||| | Sbjct 129984 AGTGCCAAGATAGGCCTCAGCAATTTCCTTCATTTTACTAAGAACCATAGCCGAAACCTC 130043 Query 518377 TTCTGGGG---AATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATT 518433 || |||| | || || | | | | ||| |||| | ||| ||||| || Sbjct 130044 CTCGGGGGCGAACCCTTTCT--CCTCCGTCCCTACTTGA-ACTTGCATATACGGTTTGTT 130100 Query 518434 ACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATT 518493 | || || ||||| || || || ||| ||||| ||| ||| || || | Sbjct 130101 ATTCTTGTTGATCACTTTGAACGGGTAGCGTTTGATATCACTTTGCACATCTTTATCGTC 130160 Query 518494 AAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATT--AATTGCA 518551 | |||| | ||| || | ||||| || ||||| | |||||| | ||||| || | || Sbjct 130161 ATAATCACGACCGATGAGACGTTTGGCGTCAAACAAAGTATTCTTAGGATTCGAAGT-CA 130219 Query 518552 GCTTGATATTTGGCTGCATCTCCAATCAGATGTT--CTGTC-TCTGTAAATGAAACATAT 518608 ||||| ||| || || || |||||||| ||| | ||| | | || | |||||| Sbjct 130220 -ATTGATTTTTTGCAGCGTCACCAATCAGTCGTTCACCGTCACCAGAGAAGGCAACATAA 130278 Query 518609 GATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCAT 518668 ||||| ||| | || || |||||||| || | ||| |||||||| || |||| | Sbjct 130279 GATGGGGTTATTCGGTTGCCTTGATCGTTTGTAATGATTTCAACACGTCCGTTTTTGAAA 130338 Query 518669 ACACCTACAC 518678 ||||| |||| Sbjct 130339 ACACCAACAC 130348 Score = 114 bits (126), Expect = 1e-19 Identities = 269/405 (66%), Gaps = 12/405 (3%) Strand=Plus/Plus Query 517270 AAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGC 517329 |||||||||||| |||| | || || || |||||||||||||| | || | |||| Sbjct 128946 AAGAATACCATTTACATCAATTTCGAAGGTAACTTCAATTTGAGGTAAACCACGAGGAGC 129005 Query 517330 AGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCG 517389 || || || ||| ||||| || | |||||| || ||| |||||||| | | || Sbjct 129006 CGGCGGAATGCCTGTCAAATCGAACTTGCCCAGAAAATGATTGTCTTTAGTCATTGGACG 129065 Query 517390 TTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCTGAATAAGTTGTAAA 517446 ||||||||||| | || ||||| |||||| ||||| || | ||| | ||| Sbjct 129066 CTCACCCTCGAATACCTGAATAGT---GACAGTTGGCTGATTGTCGGCGGCAGTCGAAAA 129122 Query 517447 TACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACC 517506 | | |||||||| ||||| || ||||| ||||| |||||||||| ||| Sbjct 129123 GATTTGCGATTTTTTGGTGGGAATGACAGTATTTCTGGGAATAAGTTTGGTCATAACACC 129182 Query 517507 ACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAG 517566 || | || || | ||| | || | || ||||| | || || |||| | Sbjct 129183 CCCAACAGTCTCAATACCCATAGTCAATGGGCAAACATCGAGGAGCACGATATCACCAGT 129242 Query 517567 TTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGC 517626 | |||| | ||| || || | | ||||| | ||||||||||| |||||||| Sbjct 129243 GTCTTCAAC------ACCGCTAATAACACCAGCTTGCACTGCAGCACCATAAGCAACAGC 129296 Query 517627 TTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 517671 |||||| || |||| | | | || ||| ||| ||||| || || Sbjct 129297 TTCATCGGGGTTAATACCTCTACTTGGTTCTTTGCCATTAAAGAA 129341 >seq5041 Length=10072 Score = 132 bits (146), Expect = 4e-25 Identities = 405/625 (65%), Gaps = 4/625 (1%) Strand=Plus/Minus Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149 |||| ||||||| | |||||| || || ||||||| ||| || | || ||||| Sbjct 654 TCAATGGACAAAATGGACACATCAAAAGTGCCGCCACCCAAATCGAAGACGAGCACATTG 595 Query 518150 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209 | | ||| || | || | || || |||| |||||| || ||||| ||||| Sbjct 594 CGCTGCTCGTCGCTCTTCCTGTCTAAGCCGTAGGCAATAGCAGCTGCTGTTGGCTCATTG 535 Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269 |||| | || ||||| | || || | ||||||||||||| | ||||| || | ||| Sbjct 534 ATAAGACGCATCACATTTAAGCCCGCCAATCTTCCTGCATCTATTGTGGCCTGCCGTTGA 475 Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329 | | ||||| || || || || || || || || || ||||| || || || | ||| Sbjct 474 TTAACATTAAAGTACGCTGGCACTGTGATTACCGCGTCTGTTACCTCCTTGCCCAAATAC 415 Query 518330 GCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAAT-- 518387 || ||| | | ||||| || | | ||| ||||| || |||||| | ||| Sbjct 414 GCCTCTGCTGCCTCCTTCATCTTCGACAGCACCATAGATGAGATCTGTTCT--GCAATGA 357 Query 518388 ATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAA 518447 | |||| | | | || ||| |||| | ||| | | || ||||| | | Sbjct 356 AATGCTCTGCCTTGCCGCCAAATTGTACCTCAATCTTCGGTATCTCTCCCACATTTACGA 297 Query 518448 CTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAA 518507 |||| |||||||||| || || | ||| || || || | || | || | Sbjct 296 CTTTGAATGGCCAGTGCTTAATGCTTTCTTGCACTGCTTCATCGTCGAAGCGACGTCCTA 237 Query 518508 TTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTG 518567 ||| | ||| ||| |||| |||||||| || || | ||| || || | || || | Sbjct 236 TTAGACACTTTATATCGAAAACGGTATTGGTGGGGTTTAGTGCTGCCTGGTTCTTTGCGG 177 Query 518568 CATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTAC 518627 | || || || ||| | || | ||||| || | ||||| || ||||| || || Sbjct 176 CCTCACCGATGAGACGNTCATTGTCTGTGAAGGCTACATAACTGGGTGTTGTTCGGGAAC 117 Query 518628 CTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAG 518687 ||||||| | || |||||||| || | |||||||| | ||||| ||||| | Sbjct 116 CTTGATCGNTGGCGATAATTTCCACCCTGCCATTTTGAAACACACCAACACATGAGCAGA 57 Query 518688 TTGTTCCTAAATCAATACCAATAGC 518712 |||||| |||||||| || ||||| Sbjct 56 CTGTTCCCAAATCAATGCCGATAGC 32 >seq9595 Length=4027 Score = 125 bits (138), Expect = 5e-23 Identities = 351/536 (65%), Gaps = 6/536 (1%) Strand=Plus/Plus Query 518180 TACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATT 518239 || |||| |||||| || ||||| ||| | | || | || ||||| | ||| |||||| Sbjct 27 TAGGCAAGAGCAGCTGCCGTTGGCTCACTGACGATGCGCATCACATTCAAACCCGCAATT 86 Query 518240 CTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATA 518299 | |||||||| | || || || | ||| ||||||||| || |||||||| || Sbjct 87 TTGCCTGCATCAGTCGTTGCCTGACGTTGGTTGCTGTTAAAATACGCCGGAACAGTGATC 146 Query 518300 ACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAA 518359 || ||||| || || || || ||||||| ||| || | ||||| | | Sbjct 147 ACAGCATCTGTCACCCTCTTGCCCGTATAAGCTTCTGCTGTCTTCTTCATCTCCAGCAGC 206 Query 518360 ATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATTTTGATATGAT---ACT 518416 | ||| || || || | |||| | | |||| || | ||||| | | | ||| Sbjct 207 ACCATAGACGAGATCTCCTCTGCAGTAAATTGTTTTG--TCATTCC-ACAGCACCTCACT 263 Query 518417 TCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGAT 518476 |||| | || || ||| || | || ||||||||||||| ||||||| | Sbjct 264 TCAACCTTCGGCTTTTTATTGGAGTTTACCACCTTAAATGGCCAGTGCATCATATCACTT 323 Query 518477 TGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTG 518536 || || | |||||| || | || || | || ||| ||||| ||| ||||| Sbjct 324 TGCACTGCCTCGTCATTGAAGCGACGTCCGATCAGGCGCTTTACATCATAAACTGTATTC 383 Query 518537 GTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTA 518596 || ||||| || ||||| || | || |||||||| || || || | || | || || Sbjct 384 GTGGGATTCATGGCAGCCTGGTTCTTTGCTGCATCACCGATGAGGAGCTCCTTATCCGTG 443 Query 518597 AATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTA 518656 |||| || || || || |||| | ||| || |||| || || |||||||| || Sbjct 444 AATGCGACGTAGCTCGGTGTCTTGCGGTCACCCTGGCCATTGGCGATGATTTCAACCTTG 503 Query 518657 CCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 || | ||| | ||||| || || || | ||||| || |||||||||||||| Sbjct 504 CCGTCTTGAAAAACACCGACGCACGAGAAGGCGGTTCCCAAGTCAATACCAATAGC 559 >seq5573 Length=3469 Score = 113 bits (124), Expect = 3e-19 Identities = 394/610 (65%), Gaps = 10/610 (2%) Strand=Plus/Plus Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167 ||||| |||| |||||||||| ||| || || ||||| || | | |||| | | Sbjct 278 ACATCGAGGGTACCACCACCCAAATCGAAGATGAGTACGTTGCTCTGCCTGTCAAGTCTC 337 Query 518168 TTA-TCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 518226 | |||| ||| || |||| |||||| || || || |||||||| || | || ||||| Sbjct 338 CTGCTCAA-ACCGTAGGCAAGAGCAGCTGCTGTAGGCTCATTAATGATGCGCATCACATT 396 Query 518227 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 518286 | || || ||| | | || || | || || | | ||| ||| |||||||| || Sbjct 397 CAAGCCCGCTATTTTGCTAGCGTCAATCGTCGCCTTCCGTTGGCTATCATTAAAATAAGC 456 Query 518287 AGGAACAGTAATAACGGCATCAGTTAC----TTCTTTACCAATATAAGCGCTTGCCGTTT 518342 || || || ||||| |||| |||| |||| |||| |||||| ||| | | Sbjct 457 CGGCACTGTGATAACTGCAT---TTACCACCTTCTCGCCCAA-ATAAGCTTCTGCTATCT 512 Query 518343 GTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCAT 518402 ||||||| | | ||| || ||||| | || | | |||| || | | | Sbjct 513 TCTTCATTTCCAGCAGCACCATGGACGAAATCTCCTCCGCAGTGAATTGTTTTGTCTTAC 572 Query 518403 TTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGT 518462 || |||||||| | || || | || | | || || |||||||||| Sbjct 573 CACAGTACCTTACTTCAACCTTCGGCTTTCCATCAGAGTCTGTCACCTTGAATGGCCAGT 632 Query 518463 ATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCAT 518522 | || || ||| || || ||| | | | | || || | || ||| ||| Sbjct 633 TCTCAATGTCGCTTTGCACTTCTTCATCAATGAGGTAACGTCCGATCAGGCGCTTTACAT 692 Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 || ||| ||||| || ||||| || ||||| || | || || ||||| ||||| || Sbjct 693 CATAAACCGTATTCGTGGGATTCATGGCAGCCTGGTTCTTTGCGGCATCGCCAATGAGGA 752 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 | ||| | || || |||| || || || ||| |||| | ||| || |||| || | Sbjct 753 GCTCTTTATCCGTGAATGCGACGTAACTCGGTGTTTTGCGGTCACCCTGGCCATTGGCGA 812 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 | |||||||| || || | ||| | || || |||||| || || ||||| || |||| Sbjct 813 TGATTTCAACCTTGCCGTCTTGAAAAACGCCGACACAAGAGAAGGTGGTTCCCAAGTCAA 872 Query 518703 TACCAATAGC 518712 |||||||||| Sbjct 873 TACCAATAGC 882 >seq7919 Length=65517 Score = 104 bits (114), Expect = 2e-16 Identities = 391/606 (65%), Gaps = 8/606 (1%) Strand=Plus/Plus Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167 ||||| |||||||||||||| |||| | | ||| ||||| | || | | Sbjct 63292 ACATCGAAGGTTCCACCACCCAAATCATAGACAAGCACATTGCGCTGCATGCCGGAGGCC 63351 Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 | || | ||| || |||| || || || || || ||||| | | | ||| ||||| Sbjct 63352 CTGTCCAAACCGTATGCAATGGCGGCTGCTGTGGGCTCATTGACGACGCGCAACACATTT 63411 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | ||| || ||||||||||||||| | || || || | || ||| || || ||||| Sbjct 63412 AAACCTGCTATTCTTCCTGCATCTATCGTCGCCTGCCGCTGGCTATCATTGAAGTATGCC 63471 Query 518288 GGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTC 518347 || || || || || ||||| | || || || | ||| || |||| | | ||| Sbjct 63472 GGTACTGTTATTACCGCATCTCTCACCTCCCCGCCCAAATATGCCTTTGCTATCTCCTTC 63531 Query 518348 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG-AATATTGCTTGGATTCATTTTG 518406 || || | | ||| |||||||| | || | || | | ||| | || | | Sbjct 63532 ATCTTCAGCAGCACCATGGATGAAATCTCCTCGGCAACAAAAGTTCTTTTCT-CACTACG 63590 Query 518407 ATATGATACTTCAAA-ATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATT 518465 ||| || |||| || | || | | | ||| || ||||| |||||||| | | Sbjct 63591 ATACTCCACCTCAATCATCGGCTTCCCTTTCGA-ATTGATGACTTTGAATGGCCAATGCT 63649 Query 518466 TCATATCTGATTGAACACTTTGG--TCATTAAAATCTCTACCAATTAATCGTTTTGCATC 518523 |||| || ||| |||| | ||||| ||| | || || | ||||| ||||| Sbjct 63650 TCATGTCGTCTTG--CACTGCCGCATCATTGAAACGGCGTCCGATCATGCGTTTCGCATC 63707 Query 518524 AAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATG 518583 |||| |||||| ||||||| | || ||||| | || || ||||| ||||| || | Sbjct 63708 GAAAACTGTATTGTTTGGATTGAGAGCCGCTTGGTTCTTAGCGGCATCACCAATGAGCCG 63767 Query 518584 TTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAAT 518643 |||| | | || || | ||||| || || ||||| |||||||| || || || Sbjct 63768 TTCTTTATTGGTGAAGGCGACATAGCTGGGCGTCGTGCGGAAGCCTTGATCGTTGGCGAT 63827 Query 518644 AATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAAT 518703 ||||| || || || | | || || || || |||||||||| | |||||| Sbjct 63828 GATTTCCACCTTGCCGCGATAAAAGACTCCAACGCACGAGTAAGTTGTTCCCAGATCAAT 63887 Query 518704 ACCAAT 518709 |||||| Sbjct 63888 ACCAAT 63893 >seq6391 Length=79790 Score = 104 bits (114), Expect = 2e-16 Identities = 391/606 (65%), Gaps = 8/606 (1%) Strand=Plus/Minus Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167 ||||| |||||||||||||| |||| | | ||| ||||| | || | | Sbjct 13267 ACATCGAAGGTTCCACCACCCAAATCATAGACAAGCACATTGCGCTGCATGCCGGAGGCC 13208 Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 | || | ||| || |||| || || || || || ||||| | | | ||| ||||| Sbjct 13207 CTGTCCAAACCGTATGCAATGGCGGCTGCTGTGGGCTCATTGACGACGCGCAACACATTT 13148 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | ||| || ||||||||||||||| | || || || | || ||| || || ||||| Sbjct 13147 AAACCTGCTATTCTTCCTGCATCTATCGTCGCCTGCCGCTGGCTATCATTGAAGTATGCC 13088 Query 518288 GGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTC 518347 || || || || || ||||| | || || || | ||| || |||| | | ||| Sbjct 13087 GGTACTGTTATTACCGCATCTCTCACCTCCCCGCCCAAATATGCCTTTGCTATCTCCTTC 13028 Query 518348 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG-AATATTGCTTGGATTCATTTTG 518406 || || | | ||| |||||||| | || | || | | ||| | || | | Sbjct 13027 ATCTTCAGCAGCACCATGGATGAAATCTCCTCGGCAACAAAAGTTCTTTTCT-CACTACG 12969 Query 518407 ATATGATACTTCAAA-ATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATT 518465 ||| || |||| || | || | | | ||| || ||||| |||||||| | | Sbjct 12968 ATACTCCACCTCAATCATCGGCTTCCCTTTCGA-ATTGATGACTTTGAATGGCCAATGCT 12910 Query 518466 TCATATCTGATTGAACACTTTGG--TCATTAAAATCTCTACCAATTAATCGTTTTGCATC 518523 |||| || ||| |||| | ||||| ||| | || || | ||||| ||||| Sbjct 12909 TCATGTCGTCTTG--CACTGCCGCATCATTGAAACGGCGTCCGATCATGCGTTTCGCATC 12852 Query 518524 AAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATG 518583 |||| |||||| ||||||| | || ||||| | || || ||||| ||||| || | Sbjct 12851 GAAAACTGTATTGTTTGGATTGAGAGCCGCTTGGTTCTTAGCGGCATCACCAATGAGCCG 12792 Query 518584 TTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAAT 518643 |||| | | || || | ||||| || || ||||| |||||||| || || || Sbjct 12791 TTCTTTATTGGTGAAGGCGACATAGCTGGGCGTCGTGCGGAAGCCTTGATCGTTGGCGAT 12732 Query 518644 AATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAAT 518703 ||||| || || || | | || || || || |||||||||| | |||||| Sbjct 12731 GATTTCCACCTTGCCGCGATAAAAGACTCCAACGCACGAGTAAGTTGTTCCCAGATCAAT 12672 Query 518704 ACCAAT 518709 |||||| Sbjct 12671 ACCAAT 12666 >seq24 Length=13158 Score = 102 bits (112), Expect = 6e-16 Identities = 389/608 (64%), Gaps = 6/608 (1%) Strand=Plus/Plus Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167 ||||| ||| |||||||||| ||| || || ||||| || |||| | Sbjct 11246 ACATCGAAGGTACCACCACCCAAATCGAAGATGAGTACGTTGCGCCGCCTGTCAACCCTC 11305 Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || | | ||| || |||| |||||| || |||| ||| | | || | || ||||| Sbjct 11306 TTGCCCAAACCGTAGGCAAGAGCAGCTGCCATTGGCTCACTGACGATGCGCATCACATTC 11365 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | ||| |||||| | |||||||| | || || || | ||| ||||||||| || Sbjct 11366 AAACCCGCAATTTTGCCTGCATCAATCGTTGCCTGACGTTGGTTGCTGTTAAAATACGCC 11425 Query 518288 GGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTC 518347 |||||||| || || ||||| | || || || ||||||| ||| || | ||| Sbjct 11426 GGAACAGTGATCACAGCATCTATCACCCTCTTGCCCGTATAAGCTTCTGCTGTCTTCTTC 11485 Query 518348 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATTTTGA 518407 || | | | ||| || || || | || | | | |||| || | ||||| | Sbjct 11486 ATCTCCAGCAGCACCATAGACGAGATCTCCTCCGCAGTAAATTGTTTTG--TCATTCC-A 11542 Query 518408 TATGAT---ACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTAT 518464 | | || |||| | || || ||| || | || ||||||||||||| Sbjct 11543 CAGCACCTCACATCAACCTCCGGCTTTTTATTGGAGTTTACCACCTTAAATGGCCAGTGC 11602 Query 518465 TTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCA 518524 ||||||| ||| || | |||||| || | ||||| | || || ||||| Sbjct 11603 ATCATATCACTTTGCACTGCCTCGTCATTGAAGCGACGTCCAATCAGGCGCTTAACATCA 11662 Query 518525 AAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT 518584 ||| ||||| || ||||| || ||||| || | || || ||| | || | || | | Sbjct 11663 TAAACCGTATTCGTGGGATTCATGGCAGCCTGCTTCTTTGCGGCAACACCGGTGAGGTAT 11722 Query 518585 TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATA 518644 ||| | || ||||| | | | | || ||| |||| | |||| |||| || || Sbjct 11723 TCTCTGTCCGTAAAGGCGAAAAAACTCGGGGTTTTGCGGTCACCTAAGCCATTGGCGATG 11782 Query 518645 ATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATA 518704 ||| |||| | || | ||| | || || |||||| || || ||||| || |||||| Sbjct 11783 ATTCCAACCCTGCCGTCTTGAAAAACGCCAACACAAGCGAAGGTGGTTCCCAAGTCAATA 11842 Query 518705 CCAATAGC 518712 |||||||| Sbjct 11843 CCAATAGC 11850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780170796526486