Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq11759 185 1e-41
>seq11759
Length=791511
Score = 185 bits (204), Expect = 1e-41
Identities = 371/544 (68%), Gaps = 12/544 (2%)
Strand=Plus/Plus
Query 37160 ATATTTAAACAATAAA-CATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATT 37218
|| |||||| ||||| ||||||||||| || | ||||| |||| ||| |||| |
Sbjct 466057 ATGTTTAAA-AATAAGGCATGCAAAATCCGTGTGGAGGCCTTCGTCTCGACTGATCAGCT 466115
Query 37219 CATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAA 37278
||||| |||||| | || ||||| | ||| | || || | ||| || || | ||||
Sbjct 466116 CATTACTAAAGGTGAGGCCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAA 466175
Query 37279 AAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAG 37338
| || ||||||||||| | |||||||| || || || || || ||||| || | |
Sbjct 466176 ATGAACCAGAAAAGAATACGCCTTCAACGGCAGCGAACGCCACCAGACGCTCGGCGTAGG 466235
Query 37339 TTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAA 37398
|| | | || | |||||| | | |||||| ||||| |||||| |
Sbjct 466236 GTGCCTTTTTATTTGCAATCCACCTAAGCGCCCAATCGGCCTTCTTAGCAACACACGGCA 466295
Query 37399 TTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACT--ATCTGTTATATAAGTATC 37456
|||| ||| || || || ||||||| ||| || | ||| | | || |||||
Sbjct 466296 ACGTTTGAATGGCGTTAAACAGAAAGTCGCGTTC--CATTGGATCCTTGACGTAGGTATC 466353
Query 37457 AATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAA 37516
|| || | | ||||||||||| ||||| ||||| | || | || | ||||||||
Sbjct 466354 GATCAGAAGAGAGTACATTTCAGAATGAATGTTTTCGACGGCGACTTGCATTCCATAAAA 466413
Query 37517 ACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAAC 37576
||| | ||| || | | |||||| |||||| |||| || || || |||||||||||
Sbjct 466414 ACAACGAGCCTCGGGAATTTGAACCTCGTTACAAAAATTCAAAGTTAGATTTTCATTAAC 466473
Query 37577 TATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTT---CATC 37633
|| |||||||| ||||| |||||||| | ||||| || || || | || ||||
Sbjct 466474 GATGCCATCACTGGCTGCGAAGAAAGCCAAGACATACGAAATGAAGTGACGTTCGCCATC 466533
Query 37634 ATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCA 37693
||| | ||| ||| ||| | | ||| || | || ||||||||| ||||| |||||
Sbjct 466534 ATT---AAGGCTTTCCCAGTCAGTGAGATCCTTCGCTAGATCAACTTCCTCAACCGTCCA 466590
Query 37694 AAAA 37697
|||
Sbjct 466591 GAAA 466594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592219578601240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |