Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq11759 93.3 8e-14 >seq11759 Length=791511 Score = 93.3 bits (102), Expect = 8e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 25875 CGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGC 25934 |||||| ||||| || || ||||| || || ||| | || || ||||| ||||| | Sbjct 466228 CGAGCGTCTGGTGGCGTTCGCTGCCGTTGAAGGCGTATTCTTTTCTGGTTCATTTGCTTC 466169 Query 25935 CATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCAT 25994 ||| |||||||||||| || || |||||| || || |||| || ||||| || Sbjct 466168 CATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCCTCACCTTTAGTAATGAGCTGAT 466109 Query 25995 CAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCT 26033 ||| | ||||| || ||||||| |||||||| ||||| Sbjct 466108 CAGTCGAGACGAAGGCCTCCACACGGATTTTGCATGCCT 466070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928692341736640